RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RNF145Q96MT1 663 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 OSBPL11Q9BXB4 747 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 TRIM15Q9C019 465 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 ADNPQ9H2P0 1102 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 GALNT9Q9HCQ5 603 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 ADPRHL2Q9NX46 363 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 TUBD1Q9UJT1 453 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 RPS6KA6Q9UK32 745 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 SLC35A3Q9Y2D2 325 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 CSAG2Q9Y5P2 127 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 PTPRQQ9UMZ3 2332 aa16.08■□□□□ 0.16
CHMP3-207ENST00000485465 C2orf72A6NCS6 295 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 TMEM229AB2RXF0 380 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 SUV39H1O43463 412 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 FAM87AP0C7U9 286 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 ENDOUP21128 410 aaKnown RBP16.07■□□□□ 0.16
CHMP3-207ENST00000485465 CD97P48960 835 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 SELENOWP63302 87 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 RHDQ02161 417 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 ST3GAL2Q16842 350 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 ZSWIM7Q19AV6 140 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF766Q5HY98 468 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 MTX3Q5HYI7 312 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 MRPL2Q5T653 305 aaKnown RBP16.07■□□□□ 0.16
CHMP3-207ENST00000485465 RNF220Q5VTB9 566 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 C1orf146Q5VVC0 180 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 MISPQ8IVT2 679 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 CLIP4Q8N3C7 705 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 GPR32P1Q8NGA4 272 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 PHOSPHO1Q8TCT1 267 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 SCMH1Q96GD3 660 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 LRGUKQ96M69 825 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 HES7Q9BYE0 225 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 ARMC7Q9H6L4 198 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 SDHAF3Q9NRP4 125 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 OLAHQ9NV23 265 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 SAMD4AQ9UPU9 718 aaKnown RBP16.07■□□□□ 0.16
CHMP3-207ENST00000485465 TP53TG5Q9Y2B4 290 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 CHST2Q9Y4C5 530 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 WIF1Q9Y5W5 379 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 LOC400499M0QZD8 3231 aa16.07■□□□□ 0.16
CHMP3-207ENST00000485465 TRAV17A0A0B4J275 112 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 CDHR4A6H8M9 788 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 G3V3Y1 287 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 GTPBP1O00178 669 aaKnown RBP16.06■□□□□ 0.16
CHMP3-207ENST00000485465 NME2P1O60361 137 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 BCAS1O75363 584 aaPredicted RBP16.06■□□□□ 0.16
CHMP3-207ENST00000485465 SNX4O95219 450 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF682O95780 498 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 EPPINO95925 133 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 CSTAP01040 98 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 FESP07332 822 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 C8BP07358 591 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 UBL4AP11441 157 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 NME2P22392 152 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 C17orf67Q0P5P2 114 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 GLIPR1L2Q4G1C9 344 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 EIPR1Q53HC9 387 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 ASB18Q6ZVZ8 466 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 COMTD1Q86VU5 262 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 OR10Q1Q8NGQ4 319 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 C9orf43Q8TAL5 461 aaPredicted RBP16.06■□□□□ 0.16
CHMP3-207ENST00000485465 DUSP19Q8WTR2 217 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 LZICQ8WZA0 190 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 CNOT9Q92600 299 aaKnown RBP16.06■□□□□ 0.16
CHMP3-207ENST00000485465 TPD52L3Q96J77 140 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 FRMD6Q96NE9 622 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 DOHHQ9BU89 302 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 KLHL1Q9NR64 748 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 DEPPQ9NTK1 212 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 RLIMQ9NVW2 624 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 BAG5Q9UL15 447 aa16.06■□□□□ 0.16
CHMP3-207ENST00000485465 KLF13Q9Y2Y9 288 aaPredicted RBP16.06■□□□□ 0.16
CHMP3-207ENST00000485465 A0A0G2JMM0 328 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 A0A1W2PPB8 328 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 A0A1W2PRS3 328 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 TCRBV5S2A0A599 114 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 AQP12BA6NM10 295 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 C17orf51A8MQB3 221 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 KIR3DP1A8MWS1 328 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 SYT5O00445 386 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF264O43296 627 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 DPM1O60762 260 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 TRIM3O75382 744 aaPredicted RBP16.05■□□□□ 0.16
CHMP3-207ENST00000485465 PRKD3O94806 890 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 LGI1O95970 557 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 DNASE1L1P49184 302 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 PLAURQ03405 335 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 PACS2Q86VP3 889 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 GRAMD2AQ8IUY3 354 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 SULF2Q8IWU5 870 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 AQP12AQ8IXF9 295 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 RBMXL3Q8N7X1 1067 aaKnown RBP16.05■□□□□ 0.16
CHMP3-207ENST00000485465 TMEM178AQ8NBL3 297 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 FAM71CQ8NEG0 241 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 PROX1Q92786 737 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 TMEM41AQ96HV5 264 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 FAM173AQ9BQD7 235 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 LAT2Q9GZY6 243 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 HHATLQ9HCP6 504 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms