RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ADORA2A-AS1P86434 159 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 TOMM20Q15388 145 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 BCL2A1Q16548 175 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 PAGE3Q5JUK9 113 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 AAGABQ6PD74 315 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 LRRC74BQ6ZQY2 392 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 ZNF808Q8N4W9 903 aaPredicted RBP14.41□□□□□ -0.1
UPF3A-208ENST00000484246 FAM71CQ8NEG0 241 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 ABTB1Q969K4 478 aaPredicted RBP14.41□□□□□ -0.1
UPF3A-208ENST00000484246 SLC38A1Q9H2H9 487 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 SAR1AQ9NR31 198 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 MED11Q9P086 117 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 P2RX2Q9UBL9 471 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 KCNE5Q9UJ90 142 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 SH3BGRL2Q9UJC5 107 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 LEF1Q9UJU2 399 aaPredicted RBP14.41□□□□□ -0.1
UPF3A-208ENST00000484246 ACAD8Q9UKU7 415 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 SLC6A5Q9Y345 797 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 DSPPQ9NZW4 1301 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 SVILO95425 2214 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 NPIPA5A0A0B4J1W7 369 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 SERINC4A6NH21 518 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 AHRRA9YTQ3 701 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 NPIPA7E9PJI5 369 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 CLIC1O00299 241 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 DNAJA2O60884 412 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 TNFRSF21O75509 655 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 CHRM4P08173 479 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 NPIPA8P0DM63 369 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 ESRRAP11474 423 aaPredicted RBP14.4□□□□□ -0.1
UPF3A-208ENST00000484246 CD1EP15812 388 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 RPS4Y1P22090 263 aaKnown RBP14.4□□□□□ -0.1
UPF3A-208ENST00000484246 CASP9P55211 416 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 HPCAP84074 193 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 MAPK11Q15759 364 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 COQ5Q5HYK3 327 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 DCST1Q5T197 706 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 TMEM211Q6ICI0 200 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 ENPP6Q6UWR7 440 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 DLEU7Q6UYE1 221 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 ULK2Q8IYT8 1036 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 MARVELD2Q8N4S9 558 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 B4GALNT2Q8NHY0 566 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 PNPT1Q8TCS8 783 aaKnown RBP14.4□□□□□ -0.1
UPF3A-208ENST00000484246 ITLN2Q8WWU7 325 aaPredicted RBP14.4□□□□□ -0.1
UPF3A-208ENST00000484246 ARSGQ96EG1 525 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 AURKBQ96GD4 344 aaPredicted RBP14.4□□□□□ -0.1
UPF3A-208ENST00000484246 WDYHV1Q96HA8 205 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 SFXN2Q96NB2 322 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 CALML5Q9NZT1 146 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 TNFRSF10DQ9UBN6 386 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 ICAM5Q9UMF0 924 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 NDUFAF1Q9Y375 327 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 FAM215AQ9Y5M1 114 aa14.4□□□□□ -0.1
UPF3A-208ENST00000484246 CENPVL1A0A0U1RR11 272 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 FAM47E-STBD1D6RA91 191 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 ETV2O00321 342 aaPredicted RBP14.39□□□□□ -0.11
UPF3A-208ENST00000484246 EIF4E2O60573 245 aaKnown RBP14.39□□□□□ -0.11
UPF3A-208ENST00000484246 ZG16O60844 167 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 H6PDO95479 791 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 SNRPB2P08579 225 aaKnown RBP14.39□□□□□ -0.11
UPF3A-208ENST00000484246 ETFAP13804 333 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 HK1P19367 917 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 LSP1P33241 339 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 LHX2P50458 406 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 SMSP52788 366 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 DSTNP60981 165 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 ZNF117Q03924 483 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 FGFBP1Q14512 234 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 SF3B4Q15427 424 aaKnown RBP eCLIP14.39□□□□□ -0.112e-10■■■■■ 27.3
UPF3A-208ENST00000484246 RGNQ15493 299 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 GPR68Q15743 365 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 PLPPR5Q32ZL2 321 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 ACSF3Q4G176 576 aaPredicted RBP14.39□□□□□ -0.11
UPF3A-208ENST00000484246 PDZK1Q5T2W1 519 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 C1orf185Q5T7R7 199 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 PRAMEF8Q5VWM4 474 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 PRAMEF7Q5VXH5 474 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 RTL6Q6ICC9 239 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 XKRXQ6PP77 449 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 B3GNT6Q6ZMB0 384 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 CMIPQ8IY22 773 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 GTPBP8Q8N3Z3 284 aaPredicted RBP14.39□□□□□ -0.11
UPF3A-208ENST00000484246 ANKFN1Q8N957 763 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 GATSQ8NAP1 163 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 OR5M9Q8NGP3 310 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 PHOSPHO1Q8TCT1 267 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 ZBTB8AQ96BR9 441 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 PIGQQ9BRB3 760 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 CPPED1Q9BRF8 314 aaPredicted RBP14.39□□□□□ -0.11
UPF3A-208ENST00000484246 A4GALTQ9NPC4 353 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 MED17Q9NVC6 651 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 VAPAQ9P0L0 249 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 MKLN1Q9UL63 735 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 CORO2BQ9UQ03 480 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 SLC35A3Q9Y2D2 325 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 L3MBTL1Q9Y468 752 aa14.39□□□□□ -0.11
UPF3A-208ENST00000484246 AGAP5A6NIR3 686 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 ANGPT2O15123 496 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 HCRTR2O43614 444 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms