RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 C12orf54Q6X4T0 127 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 Q6ZSR9 355 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 GTF2IRD2Q86UP8 949 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 TDRPQ86YL5 185 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 LRRC8AQ8IWT6 810 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 LILRA2Q8N149 483 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 PLD6Q8N2A8 252 aaKnown RBP9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 MUC15Q8N387 334 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 OR4C3Q8NH37 302 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 OR2W6PQ8NHA6 318 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 PIK3R3Q92569 461 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 ZBTB8AQ96BR9 441 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 C3orf49Q96BT1 292 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 BBS4Q96RK4 519 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 DHRS9Q9BPW9 319 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 Q9N2J8 555 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 GIMAP4Q9NUV9 329 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 VPS29Q9UBQ0 182 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 DMGDHQ9UI17 866 aaKnown RBP9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 MCM8Q9UJA3 840 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 ZNF225Q9UK10 706 aa9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 ING1Q9UK53 422 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 C19orf53Q9UNZ5 99 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-205ENST00000483847 A0A087WV62 115 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 A0A096LPK6 155 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 IGHV3-15A0A0B4J1V0 119 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 GNG14A0A1W2PPG7 69 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 CCDC189A1A4V9 331 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 MYO1GB0I1T2 1018 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 TCF21O43680 179 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 PCDH7O60245 1069 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 YES1P07947 543 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 PABPC4LP0CB38 370 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 EGR1P18146 543 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 HNF1AP20823 631 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 ME2P23368 584 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 MPIP34949 423 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 OR3A2P47893 321 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 EFNA4P52798 201 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 MANFP55145 182 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 CDH13P55290 713 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 SLC18A2Q05940 514 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 CR1LQ2VPA4 569 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 FAM174BQ3ZCQ3 159 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 PDSS1Q5T2R2 415 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 SLC22A25Q6T423 547 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 Q6ZT83 130 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 FCRLAQ7L513 359 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 SAMD14Q8IZD0 417 aaPredicted RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 FBXL14Q8N1E6 418 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 FBF1Q8TES7 1133 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 C16orf78Q8WTQ4 265 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 MUCL1Q96DR8 90 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 MRRFQ96E11 262 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 SH3YL1Q96HL8 342 aaPredicted RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 REXO5Q96IC2 774 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 SOX7Q9BT81 388 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 LMF2Q9BU23 707 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 DPH5Q9H2P9 285 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 C12orf65Q9H3J6 166 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 CXorf36Q9H7Y0 433 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 POU2F3Q9UKI9 436 aa9.59□□□□□ -0.87
SMARCC1-205ENST00000483847 IGHV4-61A0A0C4DH41 118 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 ALG1L2C9J202 215 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 C9JVG2 144 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 STX16-NPEPL1H3BU86 382 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 MANBAO00462 879 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 STX16O14662 325 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 EIF3HO15372 352 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 PRKD3O94806 890 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 OR4F21O95013 312 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 OXSR1O95747 527 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 TGFAP01135 160 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 LINGO3P0C6S8 592 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 APEHP13798 732 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 ENPP1P22413 925 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 IGHV1-2P23083 117 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 GABRA3P34903 492 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 NR4A2P43354 598 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 FABP6P51161 128 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 ZNF83P51522 516 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 ZNF41P51814 821 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 NCBP2P52298 156 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 TIMM23BQ5SRD1 257 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 KLC3Q6P597 504 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 BHLHB9Q6PI77 547 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 ZAR1Q86SH2 424 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 TRABD2AQ86V40 505 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 CREG2Q8IUH2 290 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 OR2L13Q8N349 312 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 RFLNBQ8N5W9 214 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 CDYL2Q8N8U2 506 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 ACTRT2Q8TDY3 377 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 CPNE4Q96A23 557 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 APIPQ96GX9 242 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 RADILQ96JH8 1075 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 EBPLQ9BY08 206 aa9.58□□□□□ -0.88
SMARCC1-205ENST00000483847 COQ10BQ9H8M1 238 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms