RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 A0A087WUU8 490 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 KCNK2O95069 426 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 APOA1P02647 267 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 ALAS2P22557 587 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 AFF3P51826 1226 aaKnown RBP13.41□□□□□ -0.26
CHD3-211ENST00000481999 PLAURQ03405 335 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 SELENBP1Q13228 472 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 C1DQ13901 141 aaKnown RBP13.41□□□□□ -0.26
CHD3-211ENST00000481999 DCST2Q5T1A1 773 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 ZNF614Q8N883 585 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 PROKR2Q8NFJ6 384 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 OR9Q1Q8NGQ5 310 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 TSSK6Q9BXA6 273 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 PINK1Q9BXM7 581 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 NTMQ9P121 344 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 CLEC2DQ9UHP7 191 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 SPACA6W5XKT8 324 aa13.41□□□□□ -0.26
CHD3-211ENST00000481999 GPR179Q6PRD1 2367 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 ASNA1O43681 348 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 PIP5K1CO60331 668 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 CSO75390 466 aaKnown RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 CKMT1AP12532 417 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 FUT1P19526 365 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 SOX3P41225 446 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 DHPSP49366 369 aaPredicted RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 ANXA11P50995 505 aaKnown RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 RGS8P57771 180 aaPredicted RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 ENTPD8Q5MY95 495 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 TTLL10Q6ZVT0 673 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 VWA5B2Q8N398 1253 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 FAM26EQ8N5C1 309 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 CAMKK1Q8N5S9 505 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 NANOGP1Q8N7R0 232 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 COX18Q8N8Q8 333 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 OR2I1PQ8NGU4 316 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 TCTN2Q96GX1 697 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 LMF1Q96S06 567 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 KCNS3Q9BQ31 491 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 CNPPD1Q9BV87 410 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 POLDIP3Q9BY77 421 aaKnown RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 PTGFRNQ9P2B2 879 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 ZNF443Q9Y2A4 671 aaPredicted RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 CAB39Q9Y376 341 aaPredicted RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 LILRA5A6NI73 299 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 CTDSP2O14595 271 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 HRO43593 1189 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 PCYT1AP49585 367 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 PSG6Q00889 435 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 GNA13Q14344 377 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 SHBQ15464 509 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 SLC25A30Q5SVS4 291 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 DESI1Q6ICB0 168 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 TMPRSS9Q7Z410 1059 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 PRSS58Q8IYP2 241 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 TMEM255BQ8WV15 326 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 EFHD2Q96C19 240 aaPredicted RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 CTHRC1Q96CG8 243 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 AHCYL2Q96HN2 611 aaKnown RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 FAM46AQ96IP4 442 aaKnown RBP13.4□□□□□ -0.26
CHD3-211ENST00000481999 PRRC1Q96M27 445 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 YIPF2Q9BWQ6 316 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 SMURF1Q9HCE7 757 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 NDUFB11Q9NX14 153 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 TVP23BQ9NYZ1 205 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 STUB1Q9UNE7 303 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 TRAPPC4Q9Y296 219 aa13.4□□□□□ -0.26
CHD3-211ENST00000481999 SYNDIG1LA6NDD5 238 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 MYL12BO14950 172 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 PLOD3O60568 738 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 ADAM11O75078 769 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 TECTAO75443 2155 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 IGKV1D-16P01601 117 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 SPNP16150 400 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 S1PR1P21453 382 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 EFNA3P52797 238 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 STX4Q12846 297 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 ZNF155Q12901 538 aaPredicted RBP13.39□□□□□ -0.27
CHD3-211ENST00000481999 MLLT11Q13015 90 aaPredicted RBP13.39□□□□□ -0.27
CHD3-211ENST00000481999 ARHGAP11BQ3KRB8 267 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 CLEC12AQ5QGZ9 265 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 MANEAQ5SRI9 462 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 CCBE1Q6UXH8 406 aaPredicted RBP13.39□□□□□ -0.27
CHD3-211ENST00000481999 GDPD3Q7L5L3 318 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 PRICKLE2Q7Z3G6 844 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 DNASE2BQ8WZ79 361 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 NUDT22Q9BRQ3 303 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 POLR2J2Q9GZM3 115 aaKnown RBP13.39□□□□□ -0.27
CHD3-211ENST00000481999 LIPT1Q9Y234 373 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 ADAMTS9Q9P2N4 1935 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 IGHV1OR21-1A0A087WYE8 117 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 TLCD2A6NGC4 264 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 TMEM150CB9EJG8 249 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 TNFSF8P32971 234 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 RPS19P39019 145 aaKnown RBP13.39□□□□□ -0.27
CHD3-211ENST00000481999 GPR4P46093 362 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 MRPL2Q5T653 305 aaKnown RBP13.39□□□□□ -0.27
CHD3-211ENST00000481999 KIF18BQ86Y91 864 aa13.39□□□□□ -0.27
CHD3-211ENST00000481999 GALNT12Q8IXK2 581 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms