RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	OIP5	O43482	229 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	SCN2B	O60939	215 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	CRH	P06850	196 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	MYZAP	P0CAP1	466 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	NPIPA8	P0DM63	369 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	KIR2DL2	P43627	348 aa	Predicted RBP	13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	RPL14	P50914	215 aa	Known RBP	13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	GUSBP1	Q15486	140 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	LSM12	Q3MHD2	195 aa	Known RBP	13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	SPDYE7P	Q495Y7	208 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	SPNS3	Q6ZMD2	512 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	KIF18B	Q86Y91	864 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	CLECL1	Q8IZS7	167 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR5AK3P	Q8NH89	298 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	FNDC9	Q8TBE3	224 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	POC1B	Q8TC44	478 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	ACTRT2	Q8TDY3	377 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	SMPDL3B	Q92485	455 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	ADGRG7	Q96K78	797 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	PRPF18	Q99633	342 aa	Known RBP	13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	RNF122	Q9H9V4	155 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	ZNF175	Q9Y473	711 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	AKAP6	Q13023	2319 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596		A0A087WZY1	265 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	SCD	O00767	359 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	EPX	P11678	715 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	RNF144A	P50876	292 aa	Predicted RBP	13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	WDR4	P57081	412 aa	Known RBP	13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	EEFSEC	P57772	596 aa	Known RBP	13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	RPS26	P62854	115 aa	Known RBP	13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	PHC1	P78364	1004 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	OCRL	Q01968	901 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	ZNF117	Q03924	483 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	BST1	Q10588	318 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	PON3	Q15166	354 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	CTU2	Q2VPK5	515 aa	Known RBP	13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	PGS1	Q32NB8	556 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	KLHL26	Q53HC5	615 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	DCST2	Q5T1A1	773 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR4F3	Q6IEY1	312 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR2A2	Q6IF42	318 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	CHMP1B	Q7LBR1	199 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	P4HA3	Q7Z4N8	544 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	BTLA	Q7Z6A9	289 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	CDC20B	Q86Y33	519 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	MISP	Q8IVT2	679 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	CLEC4F	Q8N1N0	589 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR5D16	Q8NGK9	328 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	ADAMTS15	Q8TE58	950 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	MOAP1	Q96BY2	351 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	CHMP6	Q96FZ7	201 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	RNF145	Q96MT1	663 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	NUF2	Q9BZD4	464 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	KCNK9	Q9NPC2	374 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	PNPO	Q9NVS9	261 aa		13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	FAF1	Q9UNN5	650 aa	Predicted RBP	13.51	□□□□□ -0.25
CCNL1-222	ENST00000479596	RNASET2	O00584	256 aa	Known RBP	13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	MSTN	O14793	375 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	AQP8	O94778	261 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	SNUPN	O95149	360 aa	Known RBP	13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	CGA	P01215	116 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	TUBB	P07437	444 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	LINGO3	P0C6S8	592 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	IL11	P20809	199 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	SLC6A8	P48029	635 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	CPA2	P48052	419 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	IST1	P53990	364 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	EEF1A1	P68104	462 aa	Known RBP	13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	STX3	Q13277	289 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	EEF1A1P5	Q5VTE0	462 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	CBLN3	Q6UW01	205 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	CNEP1R1	Q8N9A8	125 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR8J2	Q8NGG1	315 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	B4GALNT2	Q8NHY0	566 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	ZBTB8A	Q96BR9	441 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	ZNF524	Q96C55	264 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR7D2	Q96RA2	312 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	MEAF6	Q9HAF1	191 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	HHATL	Q9HCP6	504 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	ICAM5	Q9UMF0	924 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	ITPR3	Q14573	2671 aa		13.5	□□□□□ -0.25
CCNL1-222	ENST00000479596	EIF1AY	O14602	144 aa	Known RBP	13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	ADAMDEC1	O15204	470 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	CFLAR	O15519	480 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	OPN1LW	P04000	364 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	KRT16	P08779	473 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	ALDOC	P09972	364 aa	Known RBP	13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	HPGD	P15428	266 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	ATP6V1C1	P21283	382 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	CCKAR	P32238	428 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	SOAT1	P35610	550 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	CPOX	P36551	454 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	ZNF41	P51814	821 aa	Predicted RBP	13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	SIRPA	P78324	504 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	NDUFAF6	Q330K2	333 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	MTERF4	Q7Z6M4	381 aa	Known RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms