RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 MYL9P24844 172 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 NTSR1P30989 418 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 TNFRSF17Q02223 184 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 RNLSQ5VYX0 342 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 HEPHL1Q6MZM0 1159 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 ZNF620Q6ZNG0 422 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 QSOX2Q6ZRP7 698 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 VASH1Q7L8A9 365 aaPredicted RBP10.05□□□□□ -0.8
VPS52-217ENST00000478934 MRGPREQ86SM8 312 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 Q8N402 240 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 GAL3ST3Q96A11 431 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 PRSS27Q9BQR3 290 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 SARGQ9BW04 601 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 NDEL1Q9GZM8 345 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 SLC22A4Q9H015 551 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 OR6C2Q9NZP2 312 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 NLKQ9UBE8 527 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 FBXL4Q9UKA2 621 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 ATG2AQ2TAZ0 1938 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 TMEM129A0AVI4 362 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 SYT5O00445 386 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 KLF4O43474 513 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 PRKNO60260 465 aaPredicted RBP10.05□□□□□ -0.8
VPS52-217ENST00000478934 MRPL3P09001 348 aaKnown RBP10.05□□□□□ -0.8
VPS52-217ENST00000478934 PRKAR1BP31321 381 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 GCGRP47871 477 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 ANXA11P50995 505 aaKnown RBP10.05□□□□□ -0.8
VPS52-217ENST00000478934 PLAURQ03405 335 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 TPBGQ13641 420 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 PGGHGQ32M88 737 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 CDC73Q6P1J9 531 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 KIAA1324Q6UXG2 1013 aaKnown RBP10.05□□□□□ -0.8
VPS52-217ENST00000478934 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 MBOAT2Q6ZWT7 520 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 NEIL3Q8TAT5 605 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 FAM3CQ92520 227 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 MSLNLQ96KJ4 702 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 WDFY2Q96P53 400 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 PPIL3Q9H2H8 161 aaKnown RBP10.05□□□□□ -0.8
VPS52-217ENST00000478934 UBQLN3Q9H347 655 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 IL20Q9NYY1 176 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 DAPP1Q9UN19 280 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 ADAM11O75078 769 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 RFPL3O75679 317 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SLC35G6P0C7Q6 338 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SLC2A2P11168 524 aaPredicted RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 CPMP14384 443 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 FPR3P25089 353 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 TEAD1P28347 426 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SLC16A1P53985 500 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SHC2P98077 582 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 RGS1Q08116 209 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 DECR1Q16698 335 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 DEFB110Q30KQ9 67 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 MRPL2Q5T653 305 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 XKRXQ6PP77 449 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 UBE2Q1Q7Z7E8 422 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 NR2C2APQ86WQ0 139 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 GHDCQ8N2G8 530 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 TMEM99Q8N816 258 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SRFBP1Q8NEF9 429 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 ENKURQ8TC29 256 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 GRHL3Q8TE85 626 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 MOAP1Q96BY2 351 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SIPA1Q96FS4 1042 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SCARF2Q96GP6 870 aaPredicted RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 MS4A4EQ96PG1 132 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 RMI1Q9H9A7 625 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 MOV10Q9HCE1 1003 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 MRPS18AQ9NVS2 196 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 KLHL28Q9NXS3 571 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 CLEC4AQ9UMR7 237 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 WDFY3Q8IZQ1 3526 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 E9PI62 339 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 H0YGG7 62 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 GABRPO00591 440 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 GNB5O14775 395 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 MAGEB4O15481 346 aaPredicted RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 GYPBP06028 91 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 NT5EP21589 574 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 IFNGR2P38484 337 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 ARF3P61204 181 aaPredicted RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 RPS15AP62244 130 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 SNRPD2P62316 118 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 EEF1A1P68104 462 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 KLHL12Q53G59 568 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 RNASE12Q5GAN4 147 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 FIGLAQ6QHK4 219 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 OR2L13Q8N349 312 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 LINC00471Q8N535 108 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 CLDN22Q8N7P3 220 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 ZNF614Q8N883 585 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 CYB561A3Q8NBI2 242 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 OR13C2Q8NGS9 318 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SETD6Q8TBK2 473 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 SLC7A6Q92536 515 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 TIMP4Q99727 224 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 OR2B2Q9GZK3 357 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 MCOLN1Q9GZU1 580 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 NKX2-4Q9H2Z4 354 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms