RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 PARM1Q6UWI2 310 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 KIAA1958Q8N8K9 716 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 OR2T4Q8NH00 348 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 SMPDL3BQ92485 455 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 CREB3L1Q96BA8 519 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 FUZQ9BT04 418 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 MROQ9BYG7 248 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 OR2B2Q9GZK3 357 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 EIF3KQ9UBQ5 218 aaKnown RBP13.68□□□□□ -0.22
HDAC6-220ENST00000477528 ASB4Q9Y574 426 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 FAM183AA6NL82 134 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 FAM25EA8MYX2 175 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 LGI1O95970 557 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 CISD3P0C7P0 127 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 FUT1P19526 365 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 RAB38P57729 211 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 ADAM8P78325 824 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 LEG1Q6P5S2 330 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF627Q7L945 461 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 ASB15Q8WXK1 588 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 MYADMQ96S97 322 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 BABAM2Q9NXR7 383 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 C19orf25Q9UFG5 118 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-220ENST00000477528 SNX11Q9Y5W9 270 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 PTPRFP10586 1907 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 A0A0G2JMZ2 1700 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 TRAV6A0A075B6T7 132 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 A0A1W2PR48 441 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 ARRDC5A6NEK1 342 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 SCO2O43819 266 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 NOS1APO75052 506 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-220ENST00000477528 HEXBP07686 556 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 PNMTP11086 282 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 METAP1P53582 386 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 GPR18Q14330 331 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 FAM111BQ6SJ93 734 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 OLIG3Q7RTU3 272 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 NKD1Q969G9 470 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 SLC6A17Q9H1V8 727 aa13.68□□□□□ -0.22
HDAC6-220ENST00000477528 ZAR1LA6NP61 321 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 LCMT2O60294 686 aaKnown RBP13.67□□□□□ -0.22
HDAC6-220ENST00000477528 PRSS23O95084 383 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF782Q6ZMW2 699 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-220ENST00000477528 OR9A4Q8NGU2 314 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 ORAI3Q9BRQ5 295 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 CHIAQ9BZP6 476 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 ICKQ9UPZ9 632 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 RALGAPA2Q2PPJ7 1873 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 CSO75390 466 aaKnown RBP13.67□□□□□ -0.22
HDAC6-220ENST00000477528 WBP4O75554 376 aaKnown RBP13.67□□□□□ -0.22
HDAC6-220ENST00000477528 FPR3P25089 353 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 GABRA5P31644 462 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 PDX1P52945 283 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 PLK5Q496M5 336 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 SPATC1Q76KD6 591 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 TMEM151BQ8IW70 566 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 SDR16C5Q8N3Y7 309 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 OR1E3Q8WZA6 343 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 ZMYND19Q96E35 227 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-220ENST00000477528 SACM1LQ9NTJ5 587 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 ERVK-11Q9UQG0 969 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 ERVK-19Q9WJR5 959 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 SLC35A3Q9Y2D2 325 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 IER3IP1Q9Y5U9 82 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 MAU2Q9Y6X3 613 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 IQCMA0A1B0GVH7 501 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 CTXN1P60606 82 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 QSOX2Q6ZRP7 698 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 OR51L1Q8NGJ5 315 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 JSRP1Q96MG2 331 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-220ENST00000477528 RBP7Q96R05 134 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 TEX101Q9BY14 249 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 METTL7AQ9H8H3 244 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 GMEB2Q9UKD1 530 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 C17orf105B2RV13 164 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 TNFRSF10CO14798 259 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 SRPX2O60687 465 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-220ENST00000477528 DPM1O60762 260 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 SPARCP09486 303 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF20P17024 532 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 EPHA2P29317 976 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 SLC1A3P43003 542 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 RASGRP3Q8IV61 690 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 SLC35F2Q8IXU6 374 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 FCAMRQ8WWV6 532 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 WDR34Q96EX3 536 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 IFT46Q9NQC8 304 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 NLKQ9UBE8 527 aa13.67□□□□□ -0.22
HDAC6-220ENST00000477528 C9J4A7 227 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF432O94892 652 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 CFIP05156 583 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 CTHP32929 405 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 STARP49675 285 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF41P51814 821 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-220ENST00000477528 NSDHLQ15738 373 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 KIAA0895LQ68EN5 471 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 LRRN1Q6UXK5 716 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 TMEFF1Q8IYR6 380 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 JAGN1Q8N5M9 183 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms