RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 AMZ1Q400G9 498 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 ANKDD1AQ495B1 522 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 FLYWCH1Q4VC44 716 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 RPL13AP3Q6NVV1 102 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 LINC00114Q6XXX2 140 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 MAMSTRQ6ZN01 415 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 BCDIN3DQ7Z5W3 292 aaKnown RBP9.08□□□□□ -0.96
USP39-214ENST00000474572 ADCK1Q86TW2 530 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 IGFN1Q86VF2 1251 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 CMIPQ8IY22 773 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 SIX5Q8N196 739 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 CYP4Z2PQ8N1L4 340 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 SLC43A2Q8N370 569 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 LSMEM1Q8N8F7 131 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 ZSCAN1Q8NBB4 408 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 C7orf57Q8NEG2 295 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 ANKK1Q8NFD2 765 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 OR51Q1Q8NH59 317 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 TMEM239Q8WW34 195 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 HS6ST2Q96MM7 605 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 TGM7Q96PF1 710 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 OR1F2PQ96R84 312 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 MIR1-1HGQ9H1L0 117 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 ZBTB20Q9HC78 741 aaPredicted RBP9.08□□□□□ -0.96
USP39-214ENST00000474572 LANCL2Q9NS86 450 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.08□□□□□ -0.96
USP39-214ENST00000474572 UCKL1Q9NWZ5 548 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 DNAJB12Q9NXW2 375 aaKnown RBP9.08□□□□□ -0.96
USP39-214ENST00000474572 CLEC2DQ9UHP7 191 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 ERGIC3Q9Y282 383 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 EXOGQ9Y2C4 368 aaKnown RBP9.08□□□□□ -0.96
USP39-214ENST00000474572 DTX4Q9Y2E6 619 aa9.08□□□□□ -0.96
USP39-214ENST00000474572 EXOSC1Q9Y3B2 195 aaKnown RBP9.08□□□□□ -0.96
USP39-214ENST00000474572 IGKV3D-11A0A0A0MRZ8 115 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 UNC119BA6NIH7 251 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SNTNA6NMZ2 147 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 RHPN2P1A8MT19 583 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 J3QRK9 145 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 HRKO00198 91 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 BHLHE40O14503 412 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 HMGN1P05114 100 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 ZGLP1P0C6A0 271 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 GKN3PP0CG01 181 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 CT45A8P0DMV1 189 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 CT45A9P0DMV2 189 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 ZNF12P17014 697 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 MAKP20794 623 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 TBXA2RP21731 343 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 CD1CP29017 333 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SSTR4P31391 388 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 ATP12AP54707 1039 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 BTG2P78543 158 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 GPLD1P80108 840 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 CFHR1Q03591 330 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 ZP2Q05996 745 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 STX4Q12846 297 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 MED22Q15528 200 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 ZNF404Q494X3 552 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 CT45A2Q5DJT8 189 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 PDZK1Q5T2W1 519 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 NXNL2Q5VZ03 156 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 QSOX2Q6ZRP7 698 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 PRSS42Q7Z5A4 293 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 ZBTB46Q86UZ6 589 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 MEX3DQ86XN8 651 aaKnown RBP9.07□□□□□ -0.96
USP39-214ENST00000474572 KMT5CQ86Y97 462 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SLC34A3Q8N130 599 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 D2HGDHQ8N465 521 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 ZNF485Q8NCK3 441 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 FAM71CQ8NEG0 241 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 OR2T33Q8NG76 320 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 OR7G1Q8NGA0 311 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 CNOT9Q92600 299 aaKnown RBP9.07□□□□□ -0.96
USP39-214ENST00000474572 HSPBAP1Q96EW2 488 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 MMABQ96EY8 250 aaPredicted RBP9.07□□□□□ -0.96
USP39-214ENST00000474572 RBM18Q96H35 190 aaKnown RBP9.07□□□□□ -0.96
USP39-214ENST00000474572 SLC41A2Q96JW4 573 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 CENPOQ9BU64 300 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 G6PC3Q9BUM1 346 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SPRTNQ9H040 489 aaPredicted RBP9.07□□□□□ -0.96
USP39-214ENST00000474572 MMP27Q9H306 513 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 OR52D1Q9H346 318 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SIAEQ9HAT2 523 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 Q9N2J8 555 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 NDUFB11Q9NX14 153 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SOHLH2Q9NX45 425 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SIDT1Q9NXL6 827 aaKnown RBP9.07□□□□□ -0.96
USP39-214ENST00000474572 FLRT3Q9NZU0 649 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 LRIT1Q9P2V4 623 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SEC14L4Q9UDX3 406 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 SIGLEC7Q9Y286 467 aa9.07□□□□□ -0.96
USP39-214ENST00000474572 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CCDC163A0A0D9SF12 145 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ANKRD33BA6NCL7 494 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 C19orf67A6NJJ6 358 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 J3QRE1 110 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 STK25O00506 426 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 MYL12BO14950 172 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 BCAT2O15382 392 aaPredicted RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 DUX1O43812 170 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms