RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 EGLN2Q96KS0 407 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 AMDHD1Q96NU7 426 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 C19orf24Q9BVV8 132 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 STMN4Q9H169 189 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-223ENST00000473345 COQ10BQ9H8M1 238 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 MED17Q9NVC6 651 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 PRSS50Q9UI38 385 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 PSME2Q9UL46 239 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
MCF2L-223ENST00000473345 IGHV3-15A0A0B4J1V0 119 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 FAM234BA2RU67 622 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 WIPF1O43516 503 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 DLX3O60479 287 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 TMCC2O75069 709 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 BCAS2O75934 225 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 OTCP00480 354 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ADAP00813 363 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 RBP1P09455 135 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 LINGO3P0C6S8 592 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ACP2P11117 423 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 FCGR2AP12318 317 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 DDCP20711 480 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ENPP1P22413 925 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ADH6P28332 368 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 GABRA3P34903 492 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 PRIM2P49643 509 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 NCBP2P52298 156 aaKnown RBP eCLIP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 FOXG1P55316 489 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 CTBP2P56545 445 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 RPS3AP61247 264 aaKnown RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 SLC18A2Q05940 514 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 FGFBP1Q14512 234 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 P2RY6Q15077 328 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 RASA2Q15283 850 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 TOMM34Q15785 309 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 NDUFAF6Q330K2 333 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 EXOSC6Q5RKV6 272 aaKnown RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ZNF678Q5SXM1 525 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 HBMQ6B0K9 141 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ANKRD26P1Q6NSI1 321 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 KLC3Q6P597 504 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 GALNT18Q6P9A2 607 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 DNAJC14Q6Y2X3 702 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 BEND4Q6ZU67 534 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 FAM110BQ8TC76 370 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 OSTF1Q92882 214 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 GTPBP3Q969Y2 492 aaKnown RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 DTNBP1Q96EV8 351 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 SH3YL1Q96HL8 342 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 PRRG4Q9BZD6 226 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ROPN1BQ9BZX4 212 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 OR10A4Q9H209 315 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ACSS3Q9H6R3 686 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 CXorf36Q9H7Y0 433 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 ROPN1Q9HAT0 212 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 EQTNQ9NQ60 294 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 TAS2R9Q9NYW1 312 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 TMEM216Q9P0N5 145 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 SNX6Q9UNH7 406 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 PTGDR2Q9Y5Y4 395 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 FREM1Q5H8C1 2179 aa8.52□□□□□ -1.05
MCF2L-223ENST00000473345 YLPM1P49750 1951 aaKnown RBP8.52□□□□□ -1.05
MCF2L-223ENST00000473345 A0A087WUV0 522 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-223ENST00000473345 NPIPA5A0A0B4J1W7 369 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 A0A1W2PP18 115 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 GNG14A0A1W2PPG7 69 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 C7orf72A4D263 438 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 ALG1L2C9J202 215 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 C9JVG2 144 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 E7EQL1 145 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 NPIPA7E9PJI5 369 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 LINC01387J3KSC0 135 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 LYZL6O75951 148 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 PLGP00747 810 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-223ENST00000473345 SHBGP04278 402 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 CD3EP07766 207 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 ANXA4P09525 319 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-223ENST00000473345 NPIPA8P0DM63 369 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 IGHV4-31P0DP07 118 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 ZNF16P17020 682 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-223ENST00000473345 ZNF17P17021 662 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 GCAP28676 217 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 NTF4P34130 210 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 SFTPDP35247 375 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 MANFP55145 182 aaKnown RBP8.51□□□□□ -1.05
MCF2L-223ENST00000473345 RAC1P63000 192 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 C17orf67Q0P5P2 114 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 C2orf80Q0P641 193 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 FOXF1Q12946 379 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 DECR1Q16698 335 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 TNFAIP8L3Q5GJ75 292 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 CCNJQ5T5M9 372 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 CBLN3Q6UW01 205 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 MTERF4Q7Z6M4 381 aaKnown RBP8.51□□□□□ -1.05
MCF2L-223ENST00000473345 WDR75Q8IWA0 830 aaKnown RBP8.51□□□□□ -1.05
MCF2L-223ENST00000473345 ZNF525Q8N782 197 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 SLC16A11Q8NCK7 471 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 CDC26Q8NHZ8 85 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 DCAKDQ8WVC6 231 aa8.51□□□□□ -1.05
MCF2L-223ENST00000473345 ZNF75CPQ92670 426 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms