RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 GP5P40197 560 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 ELK3P41970 407 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 GSTM5P46439 218 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 HSPA7P48741 367 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 HNRNPFP52597 415 aaKnown RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 ZNF136P52737 540 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 PSMD4P55036 377 aaKnown RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 SLC37A1P57057 533 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 RAB10P61026 200 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 RPS3AP61247 264 aaKnown RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 HERVK_113P63132 956 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 ERVK-8P63133 956 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 BLOC1S1P78537 153 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 DR1Q01658 176 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 CAV1Q03135 178 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 CHIT1Q13231 466 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 SLAMF1Q13291 335 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 EFR3AQ14156 821 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 DOC2AQ14183 400 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 SLMAPQ14BN4 828 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 BCL2A1Q16548 175 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 FAM83EQ2M2I3 478 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 ERCC6LQ2NKX8 1250 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 DEPDC1Q5TB30 811 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 TIGD3Q6B0B8 471 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 TTC27Q6P3X3 843 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 RAPH1Q70E73 1250 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 CYS1Q717R9 158 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 OVCH2Q7RTZ1 564 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 NUP54Q7Z3B4 507 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 P4HA3Q7Z4N8 544 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 MYLK4Q86YV6 388 aaPredicted RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 GRAMD2AQ8IUY3 354 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 SPC24Q8NBT2 197 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 WFDC11Q8NEX6 87 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 TNIP2Q8NFZ5 429 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 OR7G3Q8NG95 312 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 OR14L1PQ8NHC6 308 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 HUS1BQ8NHY5 278 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 RHEBL1Q8TAI7 183 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 PPP1R35Q8TAP8 253 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 SPPL2AQ8TCT8 520 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 ZNF473Q8WTR7 871 aaKnown RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 TMEM171Q8WVE6 324 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 NRGNQ92686 78 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 F2RL3Q96RI0 385 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 OSBPL9Q96SU4 736 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 SERPINI1Q99574 410 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 GPR22Q99680 433 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 TIMP4Q99727 224 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 MAPKAP1Q9BPZ7 522 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 LRRC1Q9BTT6 524 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 FAIM2Q9BWQ8 316 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 OSBPL11Q9BXB4 747 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 ERVK-6Q9BXR3 956 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 UGT2B28Q9BY64 529 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 ANGPTL4Q9BY76 406 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 TINAGL1Q9GZM7 467 aaPredicted RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 IQCGQ9H095 443 aaKnown RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 STMN4Q9H169 189 aaPredicted RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 OR10A4Q9H209 315 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 PTGES2Q9H7Z7 377 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 PLEKHF2Q9H8W4 249 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 CXorf21Q9HAI6 301 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 NGBQ9NPG2 151 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 SERHLQ9NQF3 203 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 GIMAP4Q9NUV9 329 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 FAIMQ9NVQ4 179 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 TEX10Q9NXF1 929 aaPredicted RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 SENP1Q9P0U3 644 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 RNF14Q9UBS8 474 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 DKKL1Q9UK85 242 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 MRTO4Q9UKD2 239 aaKnown RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 ZDHHC8Q9ULC8 765 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 ERVK-19Q9WJR5 959 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 MRPS18CQ9Y3D5 142 aaKnown RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 ZNF175Q9Y473 711 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 TEX264Q9Y6I9 313 aa3.17□□□□□ -1.9
XRN1-209ENST00000472625 MAP1AP78559 2803 aaPredicted RBP3.17□□□□□ -1.9
XRN1-209ENST00000472625 MED13LQ71F56 2210 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 FRG2CA6NGY1 282 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 OR6C70A6NIJ9 312 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 SLC22A20A6NK97 555 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZNF785A8K8V0 405 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 SUPT3HB4E1H0 165 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 C4orf51C9J302 202 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 E7ESA3 106 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 C16orf97H3BN30 126 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PLPP1O14494 284 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZNHIT1O43257 154 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 CTIFO43310 598 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 TLX2O43763 284 aaPredicted RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 DNAJB6O75190 326 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 COQ9O75208 318 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 SUPT3HO75486 399 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 WISP2O76076 250 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 SEC31AO94979 1220 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 CLDN9O95484 217 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 AIFM1O95831 613 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ATP1B1P05026 303 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms