RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 NPIPA7E9PJI5 369 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 LINC01387J3KSC0 135 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 GTPBP1O00178 669 aaKnown RBP13.74□□□□□ -0.21
SNX13-205ENST00000471744 FBP2O00757 339 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 MRASO14807 208 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 EIF4E2O60573 245 aaKnown RBP13.74□□□□□ -0.21
SNX13-205ENST00000471744 SHOX2O60902 331 aaPredicted RBP13.74□□□□□ -0.21
SNX13-205ENST00000471744 UGT2B17O75795 530 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 DCTN3O75935 186 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 FAM107AO95990 144 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 ACTL6AO96019 429 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 C1QCP02747 245 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 TFPTP0C1Z6 253 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 NPIPA8P0DM63 369 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 CA7P43166 264 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 SYPL1Q16563 259 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 C4orf17Q53FE4 359 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 NHSL2Q5HYW2 709 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 PDZK1Q5T2W1 519 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 GCNT6Q5T4J0 391 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 WLSQ5T9L3 541 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 REP15Q6BDI9 236 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 IFNEQ86WN2 208 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 CHERPQ8IWX8 916 aaKnown RBP13.74□□□□□ -0.21
SNX13-205ENST00000471744 CMIPQ8IY22 773 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 PEX5LQ8IYB4 626 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 ANKFN1Q8N957 763 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 GATSQ8NAP1 163 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 TOR1AIP2Q8NFQ8 470 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 B4GALNT2Q8NHY0 566 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 C1GALT1C1Q96EU7 318 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 CCT8L2Q96SF2 557 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 CPPED1Q9BRF8 314 aaPredicted RBP13.74□□□□□ -0.21
SNX13-205ENST00000471744 CCDC106Q9BWC9 280 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 MYLK2Q9H1R3 596 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 SLC38A1Q9H2H9 487 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.74□□□□□ -0.21
SNX13-205ENST00000471744 ADAM21Q9UKJ8 722 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 SLC35A3Q9Y2D2 325 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 SPTBN1Q01082 2364 aaKnown RBP13.74□□□□□ -0.21
SNX13-205ENST00000471744 C15orf38-AP3S2A0A0A6YYH1 394 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 TRGV8A0A0C4DH27 118 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 A0A0G2JPF8 293 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 LOC100653049A0A140TA62 436 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 HNRNPCL2B2RXH8 293 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 HNRNPCL3B7ZW38 293 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 C5orf58C9J3I9 102 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 NPIPA2E9PIF3 369 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 NPIPA3F8WFD2 350 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 ZNF264O43296 627 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 HCRTR2O43614 444 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 HNRNPCL1O60812 293 aaKnown RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 TNFRSF21O75509 655 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 KRT34O76011 436 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 ZIC2O95409 532 aaPredicted RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 BCHEP06276 602 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 TPOP07202 933 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 CHRM4P08173 479 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 HNRNPCL4P0DMR1 293 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 UBL4AP11441 157 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 PRDX6P30041 224 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 P2RX1P51575 399 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 ZNF41P51814 821 aaPredicted RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 PER3P56645 1201 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 CHRNEQ04844 493 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 FGFBP1Q14512 234 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 CD226Q15762 336 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 ZSWIM7Q19AV6 140 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 EIPR1Q53HC9 387 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 WIPI1Q5MNZ9 446 aaPredicted RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 GKAP1Q5VSY0 366 aaPredicted RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 MTFR2Q6P444 385 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 AAGABQ6PD74 315 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 ENPP6Q6UWR7 440 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 EIF3MQ7L2H7 374 aaKnown RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 FGD2Q7Z6J4 655 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 YRDCQ86U90 279 aaKnown RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 PM20D2Q8IYS1 436 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 ANKS4BQ8N8V4 417 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 OR8J3Q8NGG0 315 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 SLC38A5Q8WUX1 472 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 RELTQ969Z4 430 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 LRRC58Q96CX6 371 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 CMTM5Q96DZ9 223 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 TMEM19Q96HH6 336 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 THUMPD3Q9BV44 507 aaKnown RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 OCEL1Q9H607 264 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 TMEM38AQ9H6F2 299 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 BCL2L10Q9HD36 194 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 ACAD8Q9UKU7 415 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 SLC5A6Q9Y289 635 aa13.73□□□□□ -0.21
SNX13-205ENST00000471744 SPENQ96T58 3664 aaKnown RBP13.73□□□□□ -0.21
SNX13-205ENST00000471744 ARHGAP21Q5T5U3 1957 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 DSPPQ9NZW4 1301 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 AGAP5A6NIR3 686 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 CSTAP01040 98 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 DBIP07108 87 aaKnown RBP13.72□□□□□ -0.21
SNX13-205ENST00000471744 HOXD4P09016 255 aaPredicted RBP13.72□□□□□ -0.21
SNX13-205ENST00000471744 ARAFP10398 606 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms