RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ZBED6CLQ96FA7 236 aaPredicted RBP3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PIWIL1Q96J94 861 aaKnown RBP3.21□□□□□ -1.9
PRPF3-204ENST00000470824 CASD1Q96PB1 797 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 SLC30A2Q9BRI3 323 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 TMEM117Q9H0C3 514 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 TIGARQ9NQ88 270 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 IMPAD1Q9NX62 359 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 ELOVL2Q9NXB9 296 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PAK5Q9P286 719 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 CHRNA9Q9UGM1 479 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 MRPS7Q9Y2R9 242 aaKnown RBP3.21□□□□□ -1.9
PRPF3-204ENST00000470824 TMEM131LA2VDJ0 1609 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 LRP5O75197 1615 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 UNC13BO14795 1591 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 E9PCH4 1651 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 KIF16BQ96L93 1317 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 ERBINQ96RT1 1412 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 TRPM2O94759 1503 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 NRXN3Q9Y4C0 1643 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 SPHKAPQ2M3C7 1700 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 FAM74A7A6NL05 159 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 E9PAM4 449 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 PPIAL4DF5H284 164 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 XPO1O14980 1071 aaKnown RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 CTAGE5O15320 804 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 MAGEB3O15480 346 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 UFL1O94874 794 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 JCHAINP01591 159 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 H2AFZP0C0S5 128 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 BCKDHAP12694 445 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 RPA2P15927 270 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 IGFBP5P24593 272 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 SHC1P29353 583 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 HMGCLP35914 325 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 CHI3L1P36222 383 aaPredicted RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 HMGCS2P54868 508 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 CNTN2Q02246 1040 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 PLOD1Q02809 727 aaPredicted RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 CAMK4Q16566 473 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 MAPK6Q16659 721 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 FAM74A3Q4VXF1 159 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 LGSNQ5TDP6 509 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 MEDAGQ5VYS4 303 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 ZNF772Q68DY9 489 aaPredicted RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 LANCL3Q6ZV70 420 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 CYS1Q717R9 158 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 DPY19L4Q7Z388 723 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 HSD11B1LQ7Z5J1 315 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 ANKRD37Q7Z713 158 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 TBC1D21Q8IYX1 336 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 FGFRL1Q8N441 504 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 POM121L12Q8N7R1 296 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 ZSCAN4Q8NAM6 433 aaPredicted RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 MAPK1IP1LQ8NDC0 245 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 OR6T1Q8NGN1 323 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 PNPT1Q8TCS8 783 aaKnown RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 TFB1MQ8WVM0 346 aaKnown RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 MYLPFQ96A32 169 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 C18orf25Q96B23 403 aaPredicted RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 TTC25Q96NG3 672 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 TEX13BQ9BXU2 312 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 POLR3FQ9H1D9 316 aaPredicted RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 CHMP4BQ9H444 224 aaKnown RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 EXOSC3Q9NQT5 275 aaKnown RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 UTP6Q9NYH9 597 aaKnown RBP3.2□□□□□ -1.9
PRPF3-204ENST00000470824 ARMCX1Q9P291 453 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 CYTH4Q9UIA0 394 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 CRLS1Q9UJA2 301 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 DUSP12Q9UNI6 340 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 OR10H1Q9Y4A9 318 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 SPACA6W5XKT8 324 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 TMEM2Q9UHN6 1383 aa3.2□□□□□ -1.9
PRPF3-204ENST00000470824 ARHGAP31Q2M1Z3 1444 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 SNED1Q8TER0 1413 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 LMTK2Q8IWU2 1503 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 IQGAP3Q86VI3 1631 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 COL22A1Q8NFW1 1626 aaPredicted RBP3.19□□□□□ -1.9
PRPF3-204ENST00000470824 GPR89AB7ZAQ6 455 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 SRPX2O60687 465 aaPredicted RBP3.19□□□□□ -1.9
PRPF3-204ENST00000470824 TRIM3O75382 744 aaPredicted RBP3.19□□□□□ -1.9
PRPF3-204ENST00000470824 KBTBD11O94819 623 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 RHOBTB1O94844 696 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 KIAA0754O94854 1291 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 HPP00738 406 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 CGAP01215 116 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 PIGRP01833 764 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 OPN1LWP04000 364 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 FAM200BP0CF97 657 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 GPR89BP0CG08 455 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 XRCC1P18887 633 aaPredicted RBP3.19□□□□□ -1.9
PRPF3-204ENST00000470824 CDH5P33151 784 aaPredicted RBP3.19□□□□□ -1.9
PRPF3-204ENST00000470824 CSRP3P50461 194 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 ARHGDIBP52566 201 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
PRPF3-204ENST00000470824 BDH1Q02338 343 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 IL18R1Q13478 541 aa3.19□□□□□ -1.9
PRPF3-204ENST00000470824 ATXN7L3Q14CW9 347 aaPredicted RBP3.19□□□□□ -1.9
PRPF3-204ENST00000470824 LTB4RQ15722 352 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms