RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 CHERPQ8IWX8 916 aaKnown RBP10.87□□□□□ -0.67
VPS13D-204ENST00000469054 METTL25Q8N6Q8 603 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 CCDC197Q8NCU1 140 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 FAM83FQ8NEG4 500 aaPredicted RBP10.87□□□□□ -0.67
VPS13D-204ENST00000469054 OR8J3Q8NGG0 315 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 TMEM19Q96HH6 336 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 TREX2Q9BQ50 279 aaPredicted RBP10.87□□□□□ -0.67
VPS13D-204ENST00000469054 OR2B2Q9GZK3 357 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 QRSL1Q9H0R6 528 aaKnown RBP10.87□□□□□ -0.67
VPS13D-204ENST00000469054 TMEM38AQ9H6F2 299 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 RUBCNLQ9H714 662 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 KAT8Q9H7Z6 458 aaKnown RBP10.87□□□□□ -0.67
VPS13D-204ENST00000469054 PTGES2Q9H7Z7 377 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 EFCAB1Q9HAE3 211 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 BCL2L10Q9HD36 194 aa10.87□□□□□ -0.67
VPS13D-204ENST00000469054 MRPS18CQ9Y3D5 142 aaKnown RBP10.87□□□□□ -0.67
VPS13D-204ENST00000469054 ZNF462Q96JM2 2506 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 A0A0G2JPF8 293 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 AGAP5A6NIR3 686 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 HNRNPCL2B2RXH8 293 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 HNRNPCL3B7ZW38 293 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 C5orf58C9J3I9 102 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 GTPBP1O00178 669 aaKnown RBP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 AQP7O14520 342 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 NDUFAB1O14561 156 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 HCRTR2O43614 444 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 ZIC3O60481 467 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 SLC19A2O60779 497 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 HNRNPCL1O60812 293 aaKnown RBP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 WISP1O95388 367 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 HNRNPCL4P0DMR1 293 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 PTGS2P35354 604 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 RNF144AP50876 292 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 KCNJ10P78508 379 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 CDK6Q00534 326 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 ART3Q13508 389 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 FGFBP1Q14512 234 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 GANABQ14697 944 aaKnown RBP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 ADRM1Q16186 407 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 WIPI1Q5MNZ9 446 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 PRAMEF8Q5VWM4 474 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 PRAMEF7Q5VXH5 474 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 FGD2Q7Z6J4 655 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 SERPINA11Q86U17 422 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 SPPL2CQ8IUH8 684 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 OR10A6Q8NH74 314 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 B4GALNT2Q8NHY0 566 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 NEIL3Q8TAT5 605 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 PRR7Q8TB68 274 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 BCAS4Q8TDM0 211 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 C1GALT1C1Q96EU7 318 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 SH3YL1Q96HL8 342 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 SLC6A15Q9H2J7 730 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 EXO5Q9H790 373 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 TAS2R10Q9NYW0 307 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 SUCOQ9UBS9 1254 aaKnown RBP10.86□□□□□ -0.67
VPS13D-204ENST00000469054 DKKL1Q9UK85 242 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 CARD8Q9Y2G2 431 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 ZNF835Q9Y2P0 537 aa10.86□□□□□ -0.67
VPS13D-204ENST00000469054 DSPPQ9NZW4 1301 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 NINQ8N4C6 2090 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 SHANK1Q9Y566 2161 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 OR14I1A6ND48 311 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 ZNHIT1O43257 154 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 ZNF264O43296 627 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 GMFGO60234 142 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 EIF4E2O60573 245 aaKnown RBP10.85□□□□□ -0.67
VPS13D-204ENST00000469054 PGM3O95394 542 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 CSTAP01040 98 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 DBIP07108 87 aaKnown RBP10.85□□□□□ -0.67
VPS13D-204ENST00000469054 UBL4AP11441 157 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 ABOP16442 354 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 IL7RP16871 459 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 HK1P19367 917 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 RPS4Y1P22090 263 aaKnown RBP10.85□□□□□ -0.67
VPS13D-204ENST00000469054 SLC6A2P23975 617 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 GZMMP51124 257 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 P2RX1P51575 399 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 ZNF117Q03924 483 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 RBBP4Q09028 425 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 CYP51A1Q16850 503 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 RABL3Q5HYI8 236 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 RPS26P11Q5JNZ5 115 aaPredicted RBP10.85□□□□□ -0.67
VPS13D-204ENST00000469054 FAM91A1Q658Y4 838 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 CBLN3Q6UW01 205 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 HACD2Q6Y1H2 254 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 Q6ZPB1 254 aaPredicted RBP10.85□□□□□ -0.67
VPS13D-204ENST00000469054 EIF3MQ7L2H7 374 aaKnown RBP10.85□□□□□ -0.67
VPS13D-204ENST00000469054 NET1Q7Z628 596 aaPredicted RBP10.85□□□□□ -0.67
VPS13D-204ENST00000469054 HMGN2P46Q86SG4 172 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 CMIPQ8IY22 773 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 PEX5LQ8IYB4 626 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 FITM2Q8N6M3 262 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 C11orf65Q8NCR3 313 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 OR52P1PQ8NH57 321 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 OR14L1PQ8NHC6 308 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 NFKBIDQ8NI38 313 aa10.85□□□□□ -0.67
VPS13D-204ENST00000469054 BBS10Q8TAM1 723 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms