RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 CCZ1P86791 482 aaPredicted RBP2.46□□□□□ -2.02
ATG3-204ENST00000467275 GALK2Q01415 458 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 PLOD1Q02809 727 aaPredicted RBP2.46□□□□□ -2.02
ATG3-204ENST00000467275 PPP1R8Q12972 351 aaKnown RBP2.46□□□□□ -2.02
ATG3-204ENST00000467275 UNC119Q13432 240 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 ZNF699Q32M78 642 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 PARP10Q53GL7 1025 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 PNCKQ6P2M8 343 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 BNIPLQ7Z465 357 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 ADAMTSL2Q86TH1 951 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 ZNF429Q86V71 674 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 GPBP1Q86WP2 473 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 BATF2Q8N1L9 274 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 FOPNLQ96NB1 174 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 ABCG4Q9H172 646 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 SYTL2Q9HCH5 934 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 DNPEPQ9ULA0 475 aa2.46□□□□□ -2.02
ATG3-204ENST00000467275 PRPF19Q9UMS4 504 aaKnown RBP2.46□□□□□ -2.02
ATG3-204ENST00000467275 RPGRIP1LQ68CZ1 1315 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 CCDC69A6NI79 296 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 H3BMH7 237 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 NBR2O15453 112 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 HSF2BPO75031 334 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 SYNGR4O95473 234 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 IGHV3-48P01763 117 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 SLC4A1P02730 911 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 TBPP20226 339 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 TMOD1P28289 359 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 HPDP32754 393 aaPredicted RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 RPL4P36578 427 aaKnown RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 CSNK1DP48730 415 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 CCL11P51671 97 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 MRPS11P82912 194 aaKnown RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 WASHC5Q12768 1159 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 CFAP221Q4G0U5 840 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 NEK5Q6P3R8 708 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 CNSTQ6PJW8 725 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 HACD2Q6Y1H2 254 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 DNM1P46Q6ZS02 220 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 HDDC3Q8N4P3 179 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 TMEM252Q8N6L7 170 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 MRPL43Q8N983 215 aaKnown RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 TMEM45BQ96B21 275 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 TMEM186Q96B77 213 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 DDX47Q9H0S4 455 aaKnown RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 FAM124BQ9H5Z6 455 aaPredicted RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 KAT8Q9H7Z6 458 aaKnown RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 RBM28Q9NW13 759 aaKnown RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 DUS2Q9NX74 493 aaKnown RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 KCNN3Q9UGI6 736 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 STRAPQ9Y3F4 350 aaKnown RBP2.45□□□□□ -2.02
ATG3-204ENST00000467275 NPC1L1Q9UHC9 1359 aa2.45□□□□□ -2.02
ATG3-204ENST00000467275 MTCL1Q9Y4B5 1905 aaKnown RBP2.44□□□□□ -2.02
ATG3-204ENST00000467275 A0A0U1RRA0 63 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 ZNF264O43296 627 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 NME2P1O60361 137 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 RCC1P18754 421 aaPredicted RBP2.44□□□□□ -2.02
ATG3-204ENST00000467275 APOC4P55056 127 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 SSTP61278 116 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 BTG3Q14201 252 aaPredicted RBP2.44□□□□□ -2.02
ATG3-204ENST00000467275 LY6EQ16553 131 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 CMPK2Q5EBM0 449 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 SLX4IPQ5VYV7 408 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 NEK11Q8NG66 645 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 PLA2G2FQ9BZM2 168 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 XPO4Q9C0E2 1151 aaKnown RBP2.44□□□□□ -2.02
ATG3-204ENST00000467275 SIRPDQ9H106 197 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 ZDHHC11Q9H8X9 412 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 SH2D2AQ9NP31 389 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 FAM153AQ9UHL3 310 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 FZR1Q9UM11 496 aa2.44□□□□□ -2.02
ATG3-204ENST00000467275 EXOSC1Q9Y3B2 195 aaKnown RBP2.44□□□□□ -2.02
ATG3-204ENST00000467275 IGHV1OR15-1A0A075B7D0 117 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 RNF103-CHMP3A0A140T963 221 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 PSMB11A5LHX3 300 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 NKX2-6A6NCS4 301 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 CFAP73A6NFT4 308 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 ARHGAP42A6NI28 874 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 SAGE2PA6NJ88 616 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 A8MUA0 341 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 STK17BO94768 372 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 KLF8O95600 359 aaPredicted RBP2.43□□□□□ -2.02
ATG3-204ENST00000467275 PCCAP05165 728 aaPredicted RBP2.43□□□□□ -2.02
ATG3-204ENST00000467275 GAP43P17677 238 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 MARCKSP29966 332 aaPredicted RBP2.43□□□□□ -2.02
ATG3-204ENST00000467275 SFNP31947 248 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 GCKP35557 465 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 LONP1P36776 959 aaKnown RBP2.43□□□□□ -2.02
ATG3-204ENST00000467275 STARP49675 285 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 LHX2P50458 406 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 ZNF136P52737 540 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 GAMTQ14353 236 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 GGTLC2Q14390 218 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 PDK1Q15118 436 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 MIER3Q7Z3K6 550 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 ELMOD2Q8IZ81 293 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 KDM8Q8N371 416 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 CCNYQ8ND76 341 aa2.43□□□□□ -2.02
ATG3-204ENST00000467275 DEDD2Q8WXF8 326 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms