RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 OR5AR1Q8NGP9 310 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 OR5K2Q8NHB8 316 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 SPATA22Q8NHS9 363 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 N4BP2L2Q92802 583 aaPredicted RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 RMND5BQ96G75 393 aaPredicted RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 MED30Q96HR3 178 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 C3orf30Q96M34 536 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 OLFM3Q96PB7 478 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 ERGIC2Q96RQ1 377 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 OLFM1Q99784 485 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 HGH1Q9BTY7 390 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 FICDQ9BVA6 458 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 PLEKHF2Q9H8W4 249 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 KCNJ16Q9NPI9 418 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 PLSCR4Q9NRQ2 329 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 STMN3Q9NZ72 180 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 HACD3Q9P035 362 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 MARCH4Q9P2E8 410 aaPredicted RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 ZNF282Q9UDV7 671 aaPredicted RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 GAGE2DQ9UEU5 116 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 WNK1Q9H4A3 2382 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SLC5A10A0PJK1 596 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 GOLGA6L4A6NEF3 574 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ZNF487B1APH4 448 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 CTDSP2O14595 271 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ANKRD28O15084 1053 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 NME2P1O60361 137 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SRPX2O60687 465 aaPredicted RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 SRP72O76094 671 aaKnown RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 PGM3O95394 542 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 AP2A1O95782 977 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SLC4A1P02730 911 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 RAF1P04049 648 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SP1P08047 785 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ICAM2P13598 275 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ATP1B2P14415 290 aaPredicted RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 FERP16591 822 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SLC26A3P40879 764 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 PRKCIP41743 596 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 RAD52P43351 418 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 EMP2P54851 167 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 NUP107P57740 925 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 EEF1A2Q05639 463 aaKnown RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 ZNF33BQ06732 778 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 GRB7Q14451 532 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 KRT33BQ14525 404 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 PTPRCAPQ14761 206 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 PCLAFQ15004 111 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 PDK2Q15119 407 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 OR1C1Q15619 314 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SLC1A5Q15758 541 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SYT16Q17RD7 645 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 TEX44Q53QW1 395 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 CMPK2Q5EBM0 449 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 TFDP3Q5H9I0 405 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SIRPB2Q5JXA9 342 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ACER2Q5QJU3 275 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 NSUN5P2Q63ZY6 315 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 SPINK14Q6IE38 97 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 C16orf54Q6UWD8 224 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ARSKQ6UWY0 536 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ZNF704Q6ZNC4 412 aaPredicted RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 KRT74Q7RTS7 529 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 APTXQ7Z2E3 356 aaKnown RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 ZNF571Q7Z3V5 609 aaPredicted RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 GALNTL5Q7Z4T8 443 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 GALNT5Q7Z7M9 940 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 CCDC190Q86UF4 302 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 VSIG1Q86XK7 387 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 CCDC71Q8IV32 467 aaPredicted RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 CLYBLQ8N0X4 340 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 C9orf106Q8NAJ2 232 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 TMEM178AQ8NBL3 297 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 OR2AK2Q8NG84 335 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 RHBDF1Q96CC6 855 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ZNF354BQ96LW1 612 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 RNF157Q96PX1 679 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 MTERF1Q99551 399 aaKnown RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 SRSF8Q9BRL6 282 aaKnown RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 UBTD1Q9HAC8 227 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 C14orf105Q9NVL8 296 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 TAB2Q9NYJ8 693 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 NKIRAS2Q9NYR9 191 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 MRPL15Q9P015 296 aaKnown RBP4.35□□□□□ -1.71
COPS3-204ENST00000462236 FAM153AQ9UHL3 310 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 POLG2Q9UHN1 485 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 GNPTGQ9UJJ9 305 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 VDAC3Q9Y277 283 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 KLHL20Q9Y2M5 609 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 ARFGEF3Q5TH69 2177 aa4.35□□□□□ -1.71
COPS3-204ENST00000462236 WNK2Q9Y3S1 2297 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 A0A1B0GTH9 108 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 A0A1W2PPR1 153 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 HYKKA2RU49 373 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 GLOD5A6NK44 160 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 TMCO5BA8MYB1 307 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 H7C0S8 307 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 ACOT8O14734 319 aa4.34□□□□□ -1.71
COPS3-204ENST00000462236 LIN7AO14910 233 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms