RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 LYG1Q8N1E2 194 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 SLC39A11Q8N1S5 342 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ANKFN1Q8N957 763 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 OR2T34Q8NGX1 318 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 CTNNBL1Q8WYA6 563 aaPredicted RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 FOXN4Q96NZ1 517 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 TMEM121Q9BTD3 319 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF385DQ9H6B1 395 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 NANSQ9NR45 359 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 RCOR3Q9P2K3 495 aaPredicted RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 GNG12Q9UBI6 72 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 PRODH2Q9UF12 536 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 TBK1Q9UHD2 729 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 MRPS33Q9Y291 106 aaKnown RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 OARD1Q9Y530 152 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ALG6Q9Y672 507 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 SLCO1B1Q9Y6L6 691 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ESYT2A0FGR8 921 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 ZSCAN5BA6NJL1 495 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 FAM74A7A6NL05 159 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 TMEM110-MUSTN1A8MSY1 372 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 A8MX80 341 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 GPAA1O43292 621 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 OR1F1O43749 312 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF354AO60765 605 aaPredicted RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 MBD3O95983 291 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 IGF1P05019 195 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 STSP08842 583 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 LAMP1P11279 417 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 CPN1P15169 458 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 PGAM2P15259 253 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF44P15621 663 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 YWHABP31946 246 aaKnown RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 CDH5P33151 784 aaPredicted RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 SLC25A1P53007 311 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 RPL32P62910 135 aaKnown RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 OTUD4Q01804 1114 aaKnown RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 OC90Q02509 493 aaPredicted RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 PJVKQ0ZLH3 352 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 IL24Q13007 206 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF154Q13106 437 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 LPAL2Q16609 132 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 NDUFA9Q16795 377 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 Q1RN00 199 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 EXOC3L2Q2M3D2 409 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 FAM74A3Q4VXF1 159 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 OR5M10Q6IEU7 315 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 REG3GQ6UW15 175 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 KDELC1Q6UW63 502 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 RGS9BPQ6ZS82 235 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 NLRP9Q7RTR0 991 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 C16orf62Q7Z3J2 963 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 ACOT1Q86TX2 421 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 MYPOPQ86VE0 399 aaPredicted RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 CDC20BQ86Y33 519 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 UNC5CLQ8IV45 518 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 CCDC50Q8IVM0 306 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 C9orf40Q8IXQ3 194 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 MCOLN2Q8IZK6 566 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 Q8N9G6 341 aaPredicted RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 STXBP6Q8NFX7 210 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF671Q8TAW3 534 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 FAM3CQ92520 227 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 MRPS31Q92665 395 aaKnown RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 EMG1Q92979 244 aaKnown RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 SH3YL1Q96HL8 342 aaPredicted RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 TTC25Q96NG3 672 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 SIGLEC12Q96PQ1 595 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 OR5B2Q96R09 309 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 CCT7Q99832 543 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 SLC39A3Q9BRY0 314 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 DPH7Q9BTV6 452 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 ZSCAN5AQ9BUG6 496 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 TEX13BQ9BXU2 312 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 MEPEQ9NQ76 525 aaPredicted RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 PNO1Q9NRX1 252 aaKnown RBP2.35□□□□□ -2.03
HDAC6-212ENST00000461608 UFSP2Q9NUQ7 469 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 ARMCX1Q9P291 453 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 SLC2A6Q9UGQ3 507 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 RASD1Q9Y272 281 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 CA5BQ9Y2D0 317 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 FLVCR1Q9Y5Y0 555 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 KANK1Q14678 1352 aa2.35□□□□□ -2.03
HDAC6-212ENST00000461608 SAGE2PA6NJ88 616 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 CCT8L1PA6NM43 557 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 OR7A17O14581 309 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 BCL2L11O43521 198 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 SRPX2O60687 465 aaPredicted RBP2.34□□□□□ -2.03
HDAC6-212ENST00000461608 PALMO75781 387 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 SLC2A10O95528 541 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 ALPIP09923 528 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 HSMCR30P0CW71 290 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 XRCC1P18887 633 aaPredicted RBP2.34□□□□□ -2.03
HDAC6-212ENST00000461608 SERPINA2P20848 420 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 ZP3P21754 424 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 CD80P33681 288 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 MAGEA5P43359 124 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 DHPSP49366 369 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms