RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 A0A1B0GVT2 93 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 ADAM11O75078 769 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 PIPP12273 146 aaPredicted RBP10.91□□□□□ -0.66
VTA1-203ENST00000452973 MYL12AP19105 171 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 MAKP20794 623 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 FPR3P25089 353 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 CD1CP29017 333 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 MTNR1AP48039 350 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 NXPH1P58417 271 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 C1DQ13901 141 aaKnown RBP10.91□□□□□ -0.66
VTA1-203ENST00000452973 ZNF846Q147U1 533 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 C14orf28Q4W4Y0 310 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 MEDAGQ5VYS4 303 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 USP43Q70EL4 1123 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 CYP4Z2PQ8N1L4 340 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 GATSQ8NAP1 163 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 TMEM239Q8WW34 195 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 GATAD2BQ8WXI9 593 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 NR4A3Q92570 626 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 OSTF1Q92882 214 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 HHATLQ9HCP6 504 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 PRDM9Q9NQV7 894 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 CHCHD3Q9NX63 227 aaKnown RBP10.91□□□□□ -0.66
VTA1-203ENST00000452973 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
VTA1-203ENST00000452973 TMEM150CB9EJG8 249 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 OR2B3O76000 313 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 NKX2-2O95096 273 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 RAB36O95755 333 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 SLC16A1P53985 500 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 CDH11P55287 796 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 FAM53BQ14153 422 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 ZNF404Q494X3 552 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 ZFP41Q8N8Y5 198 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 CADM4Q8NFZ8 388 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 OR4F15Q8NGB8 312 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 OR6Q1Q8NGQ2 317 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 FAM174AQ8TBP5 190 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 SHDQ96IW2 340 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 LMF1Q96S06 567 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 KCNS3Q9BQ31 491 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 MND1Q9BWT6 205 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 MED20Q9H944 212 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 TOR4AQ9NXH8 423 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 TLCD2A6NGC4 264 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 LILRA5A6NI73 299 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 HRO43593 1189 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 GMFGO60234 142 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 GPX5O75715 221 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 PIAS2O75928 621 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 NSA2O95478 260 aaKnown RBP10.9□□□□□ -0.66
VTA1-203ENST00000452973 STAT5AP42229 794 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 PLAURQ03405 335 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 ZCCHC12Q6PEW1 402 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 ZNF620Q6ZNG0 422 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 ATCAYQ86WG3 371 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 C16orf52Q8NHV5 167 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 EFHD2Q96C19 240 aaPredicted RBP10.9□□□□□ -0.66
VTA1-203ENST00000452973 ZDHHC12Q96GR4 267 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 TEX12Q9BXU0 123 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 OR52D1Q9H346 318 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 ANKRD19PQ9H560 264 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 PRDM6Q9NQX0 595 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 SPIN1Q9Y657 262 aaPredicted RBP10.9□□□□□ -0.66
VTA1-203ENST00000452973 CFAP54Q96N23 3096 aa10.9□□□□□ -0.66
VTA1-203ENST00000452973 WDFY4Q6ZS81 3184 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 TRAV27A0A087WT01 109 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 ZC3H12DA2A288 527 aaKnown RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 DSCR3O14972 297 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 PRODHO43272 600 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 MXD1Q05195 221 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 NPSR1Q6W5P4 371 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 CPOQ8IVL8 374 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 ZNF595Q8IYB9 648 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 AMER2Q8N7J2 671 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 NANOGP1Q8N7R0 232 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 KBTBD8Q8NFY9 601 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 OR2T33Q8NG76 320 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 OR13C2Q8NGS9 318 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 CD180Q99467 661 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 PRO3102Q9H379 93 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 TMEM27Q9HBJ8 222 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 AKIP1Q9NQ31 210 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 SIDT1Q9NXL6 827 aaKnown RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 IL20Q9NYY1 176 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 H2AFY2Q9P0M6 372 aaPredicted RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 SMIM30A4D0T7 59 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 UNC119BA6NIH7 251 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 BCAT2O15382 392 aaPredicted RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 SCG5P05408 212 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 BMP7P18075 431 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 CD79BP40259 229 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 MAP3K8P41279 467 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 PGGHGQ32M88 737 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 KLHL22Q53GT1 634 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 C1orf189Q5VU69 101 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 SPEM1Q8N4L4 309 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 OR4C3Q8NH37 302 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 FANK1Q8TC84 345 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 BPIFA2Q96DR5 249 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 VMP1Q96GC9 406 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms