RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 KLHDC3Q9BQ90 382 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 PIGQQ9BRB3 760 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 INPP5KQ9BT40 448 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 OR51I1Q9H343 314 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 HHATLQ9HCP6 504 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 ARGLU1Q9NWB6 273 aaPredicted RBP11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 CLCF1Q9UBD9 225 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 BTNL2Q9UIR0 455 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 VDAC3Q9Y277 283 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 USH1CQ9Y6N9 552 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 UNC79Q9P2D8 2635 aa11.51□□□□□ -0.57
PRPF40A-203ENST00000448428 HEATR5AQ86XA9 2040 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 HMGB1P1B2RPK0 211 aaPredicted RBP11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 H0YC42 278 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 H3BML4 177 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 DVL2O14641 736 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 OIP5O43482 229 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 FCMRO60667 390 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 DIAPH2O60879 1101 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 RCBTB2O95199 551 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 PGRP06401 933 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 OR12D1P0DN82 309 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 IDO1P14902 403 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 POU3F2P20265 443 aaPredicted RBP11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 CTSSP25774 331 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 AGFG1P52594 562 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 ATP12AP54707 1039 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 TPD52P55327 224 aaPredicted RBP11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 CLDN20P56880 219 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 FOXF2Q12947 444 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 ARHGAP11BQ3KRB8 267 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 FLYWCH1Q4VC44 716 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 PDCD4Q53EL6 469 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 SAXO2Q658L1 398 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 EPGNQ6UW88 154 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 GDF7Q7Z4P5 450 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 MISPQ8IVT2 679 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF527Q8NB42 609 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 PHOSPHO1Q8TCT1 267 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 LRRC8CQ8TDW0 803 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 XAGE5Q8WWM1 108 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 RAB8BQ92930 207 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 NEURL3Q96EH8 262 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 NPAS1Q99742 590 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 TM9SF2Q99805 663 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 SLC35A5Q9BS91 424 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 SLCO1B3Q9NPD5 702 aa11.5□□□□□ -0.57
PRPF40A-203ENST00000448428 A0A087WZY1 265 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 CCDC154A6NI56 674 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 SYT5O00445 386 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 UBDO15205 165 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 HCRTR2O43614 444 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 STX11O75558 287 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 SLC22A3O75751 556 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 TGM6O95932 706 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 IL18BPO95998 194 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 TMIGD3P0DMS9 266 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 CHI3L1P36222 383 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 CDKN2CP42773 168 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 PPP2R2AP63151 447 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF117Q03924 483 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 GPR68Q15743 365 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 GSTA3Q16772 222 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 HEPHL1Q6MZM0 1159 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 TNFAIP8L2Q6P589 184 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 CBLN3Q6UW01 205 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 CHMP1BQ7LBR1 199 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 MTERF4Q7Z6M4 381 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 MEIOBQ8N635 442 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 GOLGA6L1Q8N7Z2 621 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 GLB1L3Q8NCI6 653 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 B4GALNT2Q8NHY0 566 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 INTS12Q96CB8 462 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 C14orf79Q96F83 325 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 PANX1Q96RD7 426 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 ZBTB18Q99592 522 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 SDR39U1Q9NRG7 319 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 MED17Q9NVC6 651 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 KCNE5Q9UJ90 142 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 MKLN1Q9UL63 735 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 CARD8Q9Y2G2 431 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 DTNAQ9Y4J8 743 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 AP4B1Q9Y6B7 739 aa11.49□□□□□ -0.57
PRPF40A-203ENST00000448428 GTPBP1O00178 669 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 SEC14L5O43304 696 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 TNFRSF21O75509 655 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 SASH3O75995 380 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 TGDSO95455 350 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 AK1P00568 194 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 IL6P05231 212 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 GSNP06396 782 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 LINGO3P0C6S8 592 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 PSMA4P25789 261 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 SSTR2P30874 369 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 OPRM1P35372 400 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 IDH3AP50213 366 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ASCL1P50553 236 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF41P51814 821 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms