RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 OR2M5A3KFT3 312 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 STX11O75558 287 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 SNRPB2P08579 225 aaKnown RBP16.84■□□□□ 0.29
CCDC188-202ENST00000444532 POU3F2P20265 443 aaPredicted RBP16.84■□□□□ 0.29
CCDC188-202ENST00000444532 EEFSECP57772 596 aaKnown RBP16.84■□□□□ 0.29
CCDC188-202ENST00000444532 TMEM44Q2T9K0 475 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 ARSKQ6UWY0 536 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 CHMP1BQ7LBR1 199 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 MCEMP1Q8IX19 187 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 GATSQ8NAP1 163 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 NAXEQ8NCW5 288 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 B4GALNT2Q8NHY0 566 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 WNT2BQ93097 391 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 ZFP3Q96NJ6 502 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 PANX1Q96RD7 426 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 SLC35A5Q9BS91 424 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 NMUR2Q9GZQ4 415 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 OR51I1Q9H343 314 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 SLCO1B3Q9NPD5 702 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 NPDC1Q9NQX5 325 aaPredicted RBP16.84■□□□□ 0.29
CCDC188-202ENST00000444532 STOML1Q9UBI4 398 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 AP4B1Q9Y6B7 739 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 NBPF19A0A087WUL8 3843 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 KIAA1549Q9HCM3 1950 aa16.84■□□□□ 0.29
CCDC188-202ENST00000444532 CCDC154A6NI56 674 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 CLCA1A8K7I4 914 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 NPIPB9F8W1W9 429 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 GMFGO60234 142 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 SASH3O75995 380 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 GUSBP08236 651 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 ZNF17P17021 662 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 IGFBP2P18065 325 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 CTSSP25774 331 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 CHI3L1P36222 383 aaPredicted RBP16.83■□□□□ 0.28
CCDC188-202ENST00000444532 TXNL4AP83876 142 aaKnown RBP16.83■□□□□ 0.28
CCDC188-202ENST00000444532 CD226Q15762 336 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 ATAD3BQ5T9A4 648 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 AP1ARQ63HQ0 302 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 HEPHL1Q6MZM0 1159 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 MEX3BQ6ZN04 569 aaKnown RBP16.83■□□□□ 0.28
CCDC188-202ENST00000444532 C16orf62Q7Z3J2 963 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 MEIOBQ8N635 442 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 PHOSPHO1Q8TCT1 267 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 ZBTB8AQ96BR9 441 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 DOCK7Q96N67 2140 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 CLCF1Q9UBD9 225 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 VDAC3Q9Y277 283 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 DTNAQ9Y4J8 743 aa16.83■□□□□ 0.28
CCDC188-202ENST00000444532 C7orf72A4D263 438 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 C9JVG2 144 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 HCRTR2O43614 444 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 RCBTB2O95199 551 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 IL18BPO95998 194 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 OR12D1P0DN82 309 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 PRF1P14222 555 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 BMP5P22003 454 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 OPRM1P35372 400 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 KHKP50053 298 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 ZNF41P51814 821 aaPredicted RBP16.82■□□□□ 0.28
CCDC188-202ENST00000444532 ZNF136P52737 540 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 POMZP3Q6PJE2 187 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 GDF7Q7Z4P5 450 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 MIER2Q8N344 545 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 C9orf106Q8NAJ2 232 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 OR5M1Q8NGP8 315 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 CKAP2Q8WWK9 683 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 XAGE5Q8WWM1 108 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 SH3YL1Q96HL8 342 aaPredicted RBP16.82■□□□□ 0.28
CCDC188-202ENST00000444532 MARK4Q96L34 752 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 MAGEB18Q96M61 343 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 ACBD3Q9H3P7 528 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 SLC24A3Q9HC58 644 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 TCF7L2Q9NQB0 619 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 POLE3Q9NRF9 147 aa16.82■□□□□ 0.28
CCDC188-202ENST00000444532 ADGRG4Q8IZF6 3080 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 NPIPA5A0A0B4J1W7 369 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 NPIPA7E9PJI5 369 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 H3BML4 177 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 GTPBP1O00178 669 aaKnown RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 POLR3GO15318 223 aaPredicted RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 NPIPA8P0DM63 369 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 MRPL19P49406 292 aaKnown RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 POLR2JP52435 117 aaKnown RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 CASP9P55211 416 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 SUMO3P55854 103 aaPredicted RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 EEF1A1P68104 462 aaKnown RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 ZNF117Q03924 483 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 ZNF141Q15928 474 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 PLPPR5Q32ZL2 321 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 EEF1A1P5Q5VTE0 462 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 TNFAIP8L2Q6P589 184 aaPredicted RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 ZNF621Q6ZSS3 439 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 MSANTD1Q6ZTZ1 278 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 GRAMD2AQ8IUY3 354 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 DMRTC2Q8IXT2 367 aaPredicted RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 UBQLNLQ8IYU4 475 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 GTPBP8Q8N3Z3 284 aaPredicted RBP16.81■□□□□ 0.28
CCDC188-202ENST00000444532 OIT3Q8WWZ8 545 aa16.81■□□□□ 0.28
CCDC188-202ENST00000444532 LRRC46Q96FV0 321 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms