RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SLC2A12Q8TD20 617 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 YTHDF1Q9BYJ9 559 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 CAMK2AQ9UQM7 478 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF443Q9Y2A4 671 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 AGAP14A8MT82 685 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 TNFRSF21O75509 655 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 EFEMP2O95967 443 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 UBE2NP61088 152 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 SLC36A3Q495N2 470 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 SPATC1Q76KD6 591 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 YIPF7Q8N8F6 280 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 LINC01555Q8NAE3 123 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 MCFD2Q8NI22 146 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 SLC7A6OSQ96CW6 309 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 POU2F3Q9UKI9 436 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 SPATA2Q9UM82 520 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 TOX3O15405 576 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 TBX1O43435 398 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 TRHRP34981 398 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 WBP2NLQ6ICG8 309 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 CGB2Q6NT52 195 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 NT5CQ8TCD5 201 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 TMPRSS11EQ9UL52 423 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 PCDHGA8Q9Y5G5 932 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 RPP14O95059 124 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 UTS2O95399 124 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 NUDT6P53370 316 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 CTXN1P60606 82 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 SPNS1Q9H2V7 528 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 SRA1Q9HD15 236 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF20P17024 532 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 HOXC5Q00444 222 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 CLPPQ16740 277 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 MEP1AQ16819 746 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ZBTB8BQ8NAP8 495 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 NEURL3Q96EH8 262 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 POLR2J2Q9GZM3 115 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 SLAMF8Q9P0V8 285 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 TMEM181Q9P2C4 612 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 LAMP5Q9UJQ1 280 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF221Q9UK13 617 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 SERINC4A6NH21 518 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 OPN1LWP04000 364 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 SPARCP09486 303 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ITIH1P19827 911 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 DPP4P27487 766 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 OMPP47874 163 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 MRPL2Q5T653 305 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 AGAP7PQ5VUJ5 663 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ARHGAP11AQ6P4F7 1023 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 OR1L3Q8NH93 324 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 FAM46AQ96IP4 442 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 AGAP4Q96P64 663 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ING4Q9UNL4 249 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 GFRA3O60609 400 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 BSGP35613 385 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 STT3AP46977 705 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 MLLT10P55197 1068 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 OR7A5Q15622 319 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 TRMT12Q53H54 448 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 FBXO42Q6P3S6 717 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 IZUMO1Q8IYV9 350 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 MORN4Q8NDC4 146 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 CPPED1Q9BRF8 314 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ING3Q9NXR8 418 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 GDI2P50395 445 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 RUNX2Q13950 521 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 SLC16A11Q8NCK7 471 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ZFP90Q8TF47 636 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 DNASE2BQ8WZ79 361 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 AP3S1Q92572 193 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 CLDN23Q96B33 292 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF300Q96RE9 604 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 TOR3AQ9H497 397 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 DNAJC27Q9NZQ0 273 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 NPFFR2Q9Y5X5 522 aa13.13□□□□□ -0.31
SMARCA4-204ENST00000444061 NUDT7P0C024 238 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 PRKCAP17252 672 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 IHHQ14623 411 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 PRAMEF17Q5VTA0 474 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 GID4Q8IVV7 300 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 MMP21Q8N119 569 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 B3GNT7Q8NFL0 401 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 UFD1Q92890 307 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 VWCEQ96DN2 955 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 NKIRAS2Q9NYR9 191 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 PILRBQ9UKJ0 227 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 C19orf53Q9UNZ5 99 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 CTSVO60911 334 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 CCNKO75909 580 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 ADAP00813 363 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 FUT1P19526 365 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 NDUFAF6Q330K2 333 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 GRAMD2AQ8IUY3 354 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 ANKRD53Q8N9V6 530 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms