RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-202ENST00000439724 PRKCDQ05655 676 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 NCF4Q15080 339 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 SNAPC1Q16533 368 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 SNAP47Q5SQN1 464 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 WDR88Q6ZMY6 472 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 SLC46A3Q7Z3Q1 461 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 WDR36Q8NI36 951 aaKnown RBP10.89□□□□□ -0.67
SMAD3-202ENST00000439724 BRIX1Q8TDN6 353 aaKnown RBP10.89□□□□□ -0.67
SMAD3-202ENST00000439724 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF501Q96CX3 271 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-202ENST00000439724 HS6ST2Q96MM7 605 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF582Q96NG8 517 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-202ENST00000439724 PTCHD1Q96NR3 888 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 TSSK6Q9BXA6 273 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 TMEM27Q9HBJ8 222 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 TBC1D23Q9NUY8 699 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 MED17Q9NVC6 651 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 SERTAD3Q9UJW9 196 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 CBLCQ9ULV8 474 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD3-202ENST00000439724 TMEM5Q9Y2B1 443 aa10.89□□□□□ -0.67
SMAD3-202ENST00000439724 A0A0B4J2E0 115 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 A0A1B0GX12 115 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 A0A1B0GX78 115 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 C17orf105B2RV13 164 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 CHP2O43745 196 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 CLPXO76031 633 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 PDGFBP01127 241 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 ANKRD34CP0C6C1 535 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 FBLP22087 321 aaKnown RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 ALAS2P22557 587 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 ACAA2P42765 397 aaKnown RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 RFX3P48380 749 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 RHAGQ02094 409 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 DCTN2Q13561 401 aaKnown RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 NR0B2Q15466 257 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 PGGHGQ32M88 737 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 TMEM71Q6P5X7 295 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF550Q7Z398 422 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 BCORP1Q8N888 145 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 LSMEM1Q8N8F7 131 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 ZSCAN1Q8NBB4 408 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 OR4Q3Q8NH05 313 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 OR4C6Q8NH72 309 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 MAFAQ8NHW3 353 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 SAP25Q8TEE9 199 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 PTPMT1Q8WUK0 201 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 TMEM80Q96HE8 168 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 LRR1Q96L50 414 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 NUDT22Q9BRQ3 303 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 TEX12Q9BXU0 123 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 TRIM2Q9C040 744 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 RACGAP1Q9H0H5 632 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF304Q9HCX3 659 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 MRPS18AQ9NVS2 196 aaKnown RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 DHCR7Q9UBM7 475 aaKnown RBP10.88□□□□□ -0.67
SMAD3-202ENST00000439724 OR10H1Q9Y4A9 318 aa10.88□□□□□ -0.67
SMAD3-202ENST00000439724 ASXL3Q9C0F0 2248 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 LY6G6EA0A0G2JKS1 128 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 IRGMA1A4Y4 181 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 UNC119BA6NIH7 251 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 SNTNA6NMZ2 147 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 A8MU76 341 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 KDM4EB2RXH2 506 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-202ENST00000439724 CDC42EP2O14613 210 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 POLR1CO15160 346 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-202ENST00000439724 YKT6O15498 198 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 PRODHO43272 600 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 DYRK3O43781 588 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 INHBBP09529 407 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 CSTF2P33240 577 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMAD3-202ENST00000439724 RBM34P42696 430 aaKnown RBP10.87□□□□□ -0.67
SMAD3-202ENST00000439724 CTBP2P56545 445 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 SLC37A1P57057 533 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 OCA2Q04671 838 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 TMEM44Q2T9K0 475 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 PLK5Q496M5 336 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 MINDY4Q4G0A6 757 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 ARMCX4Q5H9R4 360 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 PEAR1Q5VY43 1037 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-202ENST00000439724 RPL13AP3Q6NVV1 102 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 LINC00299Q6ZSB3 139 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 TMPRSS11FQ6ZWK6 438 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 GATAD2AQ86YP4 633 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 TMEM151BQ8IW70 566 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 CYP4Z2PQ8N1L4 340 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF614Q8N883 585 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 TSLPQ969D9 159 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 SENP5Q96HI0 755 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-202ENST00000439724 SLC46A1Q96NT5 459 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 ZNF426Q9BUY5 554 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 YIPF2Q9BWQ6 316 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 PNO1Q9NRX1 252 aaKnown RBP10.87□□□□□ -0.67
SMAD3-202ENST00000439724 FGF21Q9NSA1 209 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 TAS2R16Q9NYV7 291 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 FLRT3Q9NZU0 649 aa10.87□□□□□ -0.67
SMAD3-202ENST00000439724 DIMT1Q9UNQ2 313 aaKnown RBP10.87□□□□□ -0.67
SMAD3-202ENST00000439724 SRPK3Q9UPE1 567 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms