RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 NPR2P20594 1047 aa8□□□□□ -1.13
HPS4-206ENST00000439453 CD70P32970 193 aa8□□□□□ -1.13
HPS4-206ENST00000439453 PTSQ03393 145 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ACSM1Q08AH1 577 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SLC27A4Q6P1M0 643 aa8□□□□□ -1.13
HPS4-206ENST00000439453 C1orf94Q6P1W5 598 aa8□□□□□ -1.13
HPS4-206ENST00000439453 KANSL1Q7Z3B3 1105 aa8□□□□□ -1.13
HPS4-206ENST00000439453 FGD2Q7Z6J4 655 aa8□□□□□ -1.13
HPS4-206ENST00000439453 POGLUT1Q8NBL1 392 aa8□□□□□ -1.13
HPS4-206ENST00000439453 FBXO15Q8NCQ5 510 aaPredicted RBP8□□□□□ -1.13
HPS4-206ENST00000439453 ASZ1Q8WWH4 475 aa8□□□□□ -1.13
HPS4-206ENST00000439453 MARC2Q969Z3 335 aa8□□□□□ -1.13
HPS4-206ENST00000439453 NEURL3Q96EH8 262 aa8□□□□□ -1.13
HPS4-206ENST00000439453 C12orf66Q96MD2 445 aa8□□□□□ -1.13
HPS4-206ENST00000439453 LYSMD1Q96S90 227 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SERHL2Q9H4I8 314 aa8□□□□□ -1.13
HPS4-206ENST00000439453 TAAR2Q9P1P5 351 aa8□□□□□ -1.13
HPS4-206ENST00000439453 CSNK1G3Q9Y6M4 447 aa8□□□□□ -1.13
HPS4-206ENST00000439453 G3V3Q6 166 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SGTAO43765 313 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 CCR6P51684 374 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 CDH11P55287 796 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 ZP1P60852 638 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 PYHIN1Q6K0P9 492 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 WASH2PQ6VEQ5 465 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 IKBIPQ70UQ0 350 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 NLRC3Q7RTR2 1065 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 KLBQ86Z14 1044 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SIAH3Q8IW03 269 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 APCDD1Q8J025 514 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 TOMM5Q8N4H5 51 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 DCAF4L2Q8NA75 395 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 MORN4Q8NDC4 146 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 OR56A3Q8NH54 315 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SLC38A2Q96QD8 506 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 ZNF436Q9C0F3 470 aaPredicted RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 BTBD1Q9H0C5 482 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 MIEF1Q9NQG6 463 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 DMRT3Q9NQL9 472 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 MAN2C1Q9NTJ4 1040 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 COPZ2Q9P299 210 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 TMEM5Q9Y2B1 443 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SESN1Q9Y6P5 492 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SPEGQ15772 3267 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SLC16A8O95907 504 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 GSTM3P21266 225 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SDHBP21912 280 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 GALP22466 123 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 IMPA1P29218 277 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 THBS2P35442 1172 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 MAPK8P45983 427 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 TPMTP51580 245 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 OPCMLQ14982 345 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 RNASE12Q5GAN4 147 aaKnown RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 NHLRC3Q5JS37 347 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 TFAP2EQ6VUC0 442 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 MRGPREQ86SM8 312 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 COMTD1Q86VU5 262 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 KLHDC8AQ8IYD2 350 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 LRRC56Q8IYG6 542 aaPredicted RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 LINC00471Q8N535 108 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 UXS1Q8NBZ7 420 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 VOPP1Q96AW1 172 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 KCTD12Q96CX2 325 aaKnown RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 SGTBQ96EQ0 304 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SCRN2Q96FV2 425 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 ZNF607Q96SK3 696 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 ZNF649Q9BS31 505 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 MS4A7Q9GZW8 240 aaPredicted RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 SPRTNQ9H040 489 aaPredicted RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 METTL17Q9H7H0 456 aaPredicted RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 CD84Q9UIB8 345 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 POMT2Q9UKY4 750 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 RASD1Q9Y272 281 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 NPTNQ9Y639 398 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 GSAPA4D1B5 854 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 FOXE1O00358 373 aaPredicted RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 RNF13O43567 381 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 UBXN7O94888 489 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SLCO2B1O94956 709 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 CD3GP09693 182 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 COL9A1P20849 921 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SERPINA4P29622 427 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 TNFRSF4P43489 277 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 SELENOPP49908 381 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 PNLIPRP1P54315 467 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 MAP4K2Q12851 820 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 TSTA3Q13630 321 aaPredicted RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 KIAA1161Q6NSJ0 714 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 RETSATQ6NUM9 610 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 TMEM92Q6UXU6 159 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 BTN2A1Q7KYR7 527 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 C1orf210Q8IVY1 113 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 OR52N1Q8NH53 320 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 RPLP0P6Q8NHW5 317 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 C2orf49Q9BVC5 232 aaPredicted RBP7.99□□□□□ -1.13
HPS4-206ENST00000439453 PLXNA2O75051 1894 aa7.99□□□□□ -1.13
HPS4-206ENST00000439453 LRRK1Q38SD2 2015 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 A0A1W2PQF6 199 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 TMEM202A6NGA9 273 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms