RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 UBXN7O94888 489 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 IL7P13232 177 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 ST6GAL1P15907 406 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 FASLGP48023 281 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 RNF144AP50876 292 aaPredicted RBP12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 HNRNPKP61978 463 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 TNFRSF17Q02223 184 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 SUZ12Q15022 739 aaKnown RBP12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 CEBPEQ15744 281 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 LIPKQ5VXJ0 399 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 MEDAGQ5VYS4 303 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 C19orf48Q6RUI8 117 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 PRICKLE2Q7Z3G6 844 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 GLCCI1Q86VQ1 547 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 ZNF582Q96NG8 517 aaPredicted RBP12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 MND1Q9BWT6 205 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 POLDIP3Q9BY77 421 aaKnown RBP12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 MRPS2Q9Y399 296 aaKnown RBP12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 LRRTM2O43300 516 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CCNYL3P0C7X3 344 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 RGS8P57771 180 aaPredicted RBP12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 RHAGQ02094 409 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 RUNX2Q13950 521 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 NCF4Q15080 339 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CEP78Q5JTW2 689 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CCNJQ5T5M9 372 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CD300LDQ6UXZ3 194 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 RRM2BQ7LG56 351 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 PRSS41Q7RTY9 318 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 OR8D4Q8NGM9 314 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 OR52P1PQ8NH57 321 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 TEX47Q8TBZ9 253 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CCDC32Q9BV29 185 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 IL21RQ9HBE5 538 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 UCKL1Q9NWZ5 548 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 IL20RAQ9UHF4 553 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CFL2Q9Y281 166 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CENPVL1A0A0U1RR11 272 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 URADA6NGE7 173 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 BCAT2O15382 392 aaPredicted RBP12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 HCRTR1O43613 425 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CH25HO95992 272 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 SMIM10L1P0DMW3 83 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 SMSP52788 366 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 CDK5Q00535 292 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 OCLNQ16625 522 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 ENTPD8Q5MY95 495 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 MFSD12Q6NUT3 480 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 ABHD13Q7L211 337 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 SHFQ7M4L6 423 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 NOXA1Q86UR1 476 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 NKAIN4Q8IVV8 208 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 FAM26EQ8N5C1 309 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 OR52I1Q8NGK6 324 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 UBASH3BQ8TF42 649 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 DIO2Q92813 273 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 SMIM10Q96HG1 83 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 SEMA6CQ9H3T2 930 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 FAM60AQ9NP50 221 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 KCMF1Q9P0J7 381 aa12.91□□□□□ -0.34
PTCHD3-201ENST00000438700 TMEM131Q92545 1883 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 LMO7DNF2Z398 122 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 LDB3O75112 727 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 PDGFBP01127 241 aaPredicted RBP12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 ETV5P41161 510 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 GPR4P46093 362 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 ETV1P50549 477 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 AFF3P51826 1226 aaKnown RBP12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 VSX2P58304 361 aaPredicted RBP12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 DEFB110Q30KQ9 67 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC27A4Q6P1M0 643 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 TMPRSS11AQ6ZMR5 421 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 FRRS1Q6ZNA5 592 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 PLEKHM3Q6ZWE6 761 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 CSNK1A1LQ8N752 337 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 NANOGP1Q8N7R0 232 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 AVL9Q8NBF6 648 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 OR4K14Q8NGD5 310 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC7A6Q92536 515 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 TMEM203Q969S6 136 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 TMCO6Q96DC7 493 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 MS4A4EQ96PG1 132 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SERINC2Q96SA4 455 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC38A3Q99624 504 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 ARHGDIGQ99819 225 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SAP130Q9H0E3 1048 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 DUSP15Q9H1R2 295 aaPredicted RBP12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 RPRD1BQ9NQG5 326 aaKnown RBP12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 STARD5Q9NSY2 213 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 LIPT1Q9Y234 373 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 SYT5O00445 386 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 B3GALT2O43825 422 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 CLEC2LP0C7M8 214 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 CAPZBP47756 277 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 GNG2P59768 71 aa12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 C1DQ13901 141 aaKnown RBP12.9□□□□□ -0.34
PTCHD3-201ENST00000438700 TRAM2Q15035 370 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms