RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ETHE1O95571 254 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 FADS2O95864 444 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 TXNDC12O95881 172 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 EGFP01133 1207 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GP1BAP07359 652 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 DCNP07585 359 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 KRT7P08729 469 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 SNRPAP09012 282 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 HIST1H2AGP0C0S8 130 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GIMD1P0DJR0 217 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CT45A8P0DMV1 189 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CT45A9P0DMV2 189 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CALM1P0DP23 149 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CALM2P0DP24 149 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CALM3P0DP25 149 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 ST6GAL1P15907 406 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 TSPAN8P19075 237 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 MAOAP21397 527 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 UGT1A4P22310 534 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 HLA-DMAP28067 261 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 HMOX2P30519 316 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 UGT1A3P35503 534 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 UGT2B10P36537 528 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 APOBEC1P41238 236 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMPOP42166 694 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 NPY2RP49146 381 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 DUSP3P51452 185 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 HNRNPMP52272 730 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 HSPA2P54652 639 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 RIPK4P57078 832 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CXCR4P61073 352 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 IL9RQ01113 521 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GAGE2BQ13066 116 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 NAB1Q13506 487 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GRB14Q14449 540 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 SPHARQ15513 63 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 TNXAQ16473 311 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GLYR1Q49A26 553 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GAGE2EQ4V326 116 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CT45A2Q5DJT8 189 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 KIAA1755Q5JYT7 1200 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 PXDC1Q5TGL8 231 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GGNBP1Q5YKI7 109 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GAGE2AQ6NT46 116 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 DHRS13Q6UX07 377 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 METTL7BQ6UX53 244 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 MON1BQ7L1V2 547 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 TRMT1LQ7Z2T5 733 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GOLGA7Q7Z5G4 137 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 RANBP3LQ86VV4 465 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CACUL1Q86Y37 369 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 BEST3Q8N1M1 668 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 SYS1Q8N2H4 156 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 SLC5A8Q8N695 610 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CSNK1A1LQ8N752 337 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CCDC197Q8NCU1 140 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 NFAM1Q8NET5 270 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR8K1Q8NGG5 319 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR4C15Q8NGM1 316 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR52E5Q8NH55 327 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR6X1Q8NH79 312 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR1F12Q8NHA8 337 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 WDR36Q8NI36 951 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 FAM110BQ8TC76 370 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 ACTL9Q8TC94 416 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF398Q8TD17 642 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 ACOT11Q8WXI4 607 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 HIST1H2ACQ93077 130 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 C8orf44Q96CB5 159 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GRAMD2BQ96HH9 432 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 SERPINB11Q96P15 392 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF251Q9BRH9 671 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GATA5Q9BWX5 397 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 PRRG4Q9BZD6 226 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 ILKAPQ9H0C8 392 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 C1orf198Q9H425 327 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 RHOJQ9H4E5 214 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 EBF3Q9H4W6 596 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 C5orf66Q9H5L9 145 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 MARCH7Q9H992 704 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 LPAR2Q9HBW0 351 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 NECAP2Q9NVZ3 263 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 MRPL39Q9NYK5 338 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CISD1Q9NZ45 108 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 NPAP1Q9NZP6 1156 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 MYEF2Q9P2K5 600 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 KLHL13Q9P2N7 655 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GNG12Q9UBI6 72 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CLN8Q9UBY8 286 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 GAGE2DQ9UEU5 116 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 MIOXQ9UGB7 285 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 NXT1Q9UKK6 140 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 IKZF2Q9UKS7 526 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 KLHDC2Q9Y2U9 406 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 TBL2Q9Y4P3 447 aaKnown RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 TIMM10BQ9Y5J6 103 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 PNPLA6Q8IY17 1366 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 MAPK8IP3Q9UPT6 1336 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms