RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 COX18Q8N8Q8 333 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 OR6K3Q8NGY3 331 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 CEP70Q8NHQ1 597 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 TMEM171Q8WVE6 324 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 SLC9A6Q92581 669 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 PPCDCQ96CD2 204 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 ZBED6CLQ96FA7 236 aaPredicted RBP6.98□□□□□ -1.29
VPS50-204ENST00000438395 COX4I2Q96KJ9 171 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 Q96MF0 132 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 AMDHD1Q96NU7 426 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 MS4A4EQ96PG1 132 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 SMR3AQ99954 134 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 GLIPR2Q9H4G4 154 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 CXorf56Q9H5V9 222 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 RNF122Q9H9V4 155 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 LRTM1Q9HBL6 345 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 SIRT5Q9NXA8 310 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 TAS2R7Q9NYW3 318 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 MID2Q9UJV3 735 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 VDAC3Q9Y277 283 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 ZNF337Q9Y3M9 751 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 ARHGAP21Q5T5U3 1957 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 DOCK7Q96N67 2140 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 NCKAP5O14513 1909 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 A0A1W2PPR1 153 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 SMIM23A6NLE4 172 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 DEFB108AA8MXU0 73 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 H0YC42 278 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 KIF2AO00139 706 aaPredicted RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 UPK1AO00322 258 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 SLC28A1O00337 649 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 SCDO00767 359 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 RIPK2O43353 540 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 AKAP10O43572 662 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 NUDT14O95848 222 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 PABPC4LP0CB38 370 aaKnown RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 ATP6V1C1P21283 382 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 PCSK6P29122 969 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 ECHS1P30084 290 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 CCKARP32238 428 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 HPCAL1P37235 193 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 MANFP55145 182 aaKnown RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 TPD52P55327 224 aaPredicted RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 PRR5P85299 388 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 OCRLQ01968 901 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 SLC29A2Q14542 456 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 GRAMD1BQ3KR37 738 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 SPDYE7PQ495Y7 208 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 FAM219BQ5XKK7 198 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 ANKRD34AQ69YU3 496 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 GTF2IRD2BQ6EKJ0 949 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 ALKBH2Q6NS38 261 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 NOXRED1Q6NXP6 359 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 ZNF474Q6S9Z5 364 aaPredicted RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 PRSS57Q6UWY2 283 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 FRMD7Q6ZUT3 714 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 PLEKHM3Q6ZWE6 761 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 GTF2IRD2Q86UP8 949 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 HOMEZQ8IX15 550 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 METTL25Q8N6Q8 603 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 CEP112Q8N8E3 955 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 CDRT4Q8N9R6 151 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 ZNF610Q8N9Z0 462 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 GATSQ8NAP1 163 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 ZNF527Q8NB42 609 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 LRRN4CLQ8ND94 238 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 OR6Y1Q8NGX8 325 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 FBXO30Q8TB52 745 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 RNF138Q8WVD3 245 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 ZBTB8AQ96BR9 441 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 ELP4Q96EB1 424 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 GMPPAQ96IJ6 420 aaPredicted RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 METTL2AQ96IZ6 378 aaKnown RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 CCT7Q99832 543 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 TACO1Q9BSH4 297 aaKnown RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 LMF2Q9BU23 707 aaKnown RBP6.97□□□□□ -1.29
VPS50-204ENST00000438395 GSTO2Q9H4Y5 243 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 TMEM185BQ9H7F4 350 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 TIGARQ9NQ88 270 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 GLRX2Q9NS18 164 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 C1orf109Q9NX04 203 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 FLRT3Q9NZU0 649 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 SH3BP4Q9P0V3 963 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 CLEC4AQ9UMR7 237 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 FIS1Q9Y3D6 152 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 SNX8Q9Y5X2 465 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 FREM3P0C091 2139 aa6.97□□□□□ -1.29
VPS50-204ENST00000438395 FN1P02751 2386 aaKnown RBP6.96□□□□□ -1.29
VPS50-204ENST00000438395 IGLV3-32A0A0A0MS00 114 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.96□□□□□ -1.3
VPS50-204ENST00000438395 GXYLT2A0PJZ3 443 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 GJE1A6NN92 205 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 ALG1L2C9J202 215 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 H3BNH8 94 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 COPEO14579 308 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 CXCL13O43927 109 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 ADAM11O75078 769 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 AQP8O94778 261 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 PSMG1O95456 288 aa6.96□□□□□ -1.3
VPS50-204ENST00000438395 HSPA4LO95757 839 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms