RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 OR1F2PQ96R84 312 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 SMOC1Q9H4F8 434 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 CBLCQ9ULV8 474 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 HEATR5AQ86XA9 2040 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 A0A1W2PPW3 197 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 ADRA2AP08913 450 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 CSNK2BP67870 215 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 ST3GAL4Q11206 333 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 DECR1Q16698 335 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 NDUFAF6Q330K2 333 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 CLEC12AQ5QGZ9 265 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 OR8D4Q8NGM9 314 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 GRHL3Q8TE85 626 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 EFHD2Q96C19 240 aaPredicted RBP15.41■□□□□ 0.06
USHBP1-203ENST00000431146 DOK1Q99704 481 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 PRSS27Q9BQR3 290 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 ANKRD19PQ9H560 264 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 POLE3Q9NRF9 147 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 CLN6Q9NWW5 311 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 GALNT8Q9NY28 637 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 TAS2R16Q9NYV7 291 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 CTSFQ9UBX1 484 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 IL20RAQ9UHF4 553 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 IGKV3D-11A0A0A0MRZ8 115 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 TRAPPC13A5PLN9 417 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 KPNA4O00629 521 aaPredicted RBP15.4■□□□□ 0.06
USHBP1-203ENST00000431146 PRKYO43930 277 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 TIAF1O95411 115 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 CDK1P06493 297 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 GIPRP48546 466 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 RHAGQ02094 409 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 TSPAN31Q12999 210 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 FAAH2Q6GMR7 532 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 ERI1Q8IV48 349 aaKnown RBP15.4■□□□□ 0.06
USHBP1-203ENST00000431146 ZSCAN1Q8NBB4 408 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 SLC38A9Q8NBW4 561 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 OR4C3Q8NH37 302 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 PFN4Q8NHR9 129 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 OR6C1Q96RD1 312 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 SLC7A5P2Q9GIP4 190 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 FKBP14Q9NWM8 211 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.4■□□□□ 0.06
USHBP1-203ENST00000431146 MMACHCQ9Y4U1 282 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 CLCA3PQ9Y6N3 262 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 IGHV5-10-1A0A0J9YXX1 117 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 ZNF701M0R085 212 aaPredicted RBP15.4■□□□□ 0.06
USHBP1-203ENST00000431146 PNLIPP16233 465 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 FUT1P19526 365 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 GSTM3P21266 225 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 IFNGR2P38484 337 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 PSMD7P51665 324 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 MLLT10P55197 1068 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 SLC37A1P57057 533 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 NSDHLQ15738 373 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 TRIM61Q5EBN2 209 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 QSOX2Q6ZRP7 698 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 MBOAT2Q6ZWT7 520 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 STX19Q8N4C7 294 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 SVOPQ8N4V2 548 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 MYDGFQ969H8 173 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 FKBP10Q96AY3 582 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 ZNF578Q96N58 590 aaPredicted RBP15.4■□□□□ 0.06
USHBP1-203ENST00000431146 ENAMQ9NRM1 1142 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 DNAJB12Q9NXW2 375 aaKnown RBP15.4■□□□□ 0.06
USHBP1-203ENST00000431146 FLRT3Q9NZU0 649 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 MKL2Q9ULH7 1088 aa15.4■□□□□ 0.06
USHBP1-203ENST00000431146 SYNDIG1LA6NDD5 238 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 CDC42EP2O14613 210 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 TLX2O43763 284 aaPredicted RBP15.39■□□□□ 0.05
USHBP1-203ENST00000431146 MPZL2O60487 215 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 NOL3O60936 208 aaKnown RBP15.39■□□□□ 0.05
USHBP1-203ENST00000431146 MSL3P1P0C860 447 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 DRD5P21918 477 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 CDK5Q00535 292 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 SLC16A12Q6ZSM3 486 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 SLC2A12Q8TD20 617 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 PELOQ9BRX2 385 aaKnown RBP15.39■□□□□ 0.05
USHBP1-203ENST00000431146 GTPBP2Q9BX10 602 aaKnown RBP15.39■□□□□ 0.05
USHBP1-203ENST00000431146 VN1R1Q9GZP7 353 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 LRRN3Q9H3W5 708 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 ARMC7Q9H6L4 198 aa15.39■□□□□ 0.05
USHBP1-203ENST00000431146 LYPD3O95274 346 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 TMBIM6P55061 237 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 TEKQ02763 1124 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 LANCL3Q6ZV70 420 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 ZBTB8BQ8NAP8 495 aaPredicted RBP15.38■□□□□ 0.05
USHBP1-203ENST00000431146 TEX47Q8TBZ9 253 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 CCDC74BQ96LY2 380 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 MESP1Q9BRJ9 268 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 NRSN2Q9GZP1 204 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 ATP13A2Q9NQ11 1180 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 SLC22A11Q9NSA0 550 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 C20orf141Q9NUB4 165 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 PRODH2Q9UF12 536 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 TESQ9UGI8 421 aaKnown RBP15.38■□□□□ 0.05
USHBP1-203ENST00000431146 TCRBV16S1A1N1A0A5B0 115 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 DDAH2O95865 285 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 CH25HO95992 272 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 ACVR2AP27037 513 aa15.38■□□□□ 0.05
USHBP1-203ENST00000431146 GALNSP34059 522 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms