RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 KCNJ10P78508 379 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 MLLT11Q13015 90 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 CHIT1Q13231 466 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZNF730Q6ZMV8 503 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 NAGSQ8N159 534 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 SLC5A8Q8N695 610 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 HGDQ93099 445 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 SCMH1Q96GD3 660 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 PPP1R16AQ96I34 528 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 TEFMQ96QE5 360 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 LRRN3E7EW58 273 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 ENTPD6O75354 484 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 CD3GP09693 182 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 HLXQ14774 488 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 OR4F3Q6IEY1 312 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 CMTM8Q8IZV2 173 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 OCSTAMPQ9BR26 566 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 CPPED1Q9BRF8 314 aaPredicted RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 SMG9Q9H0W8 520 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 MIXL1Q9H2W2 232 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 RHBGQ9H310 441 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 LRRN3Q9H3W5 708 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 CA14Q9ULX7 337 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 FCF1Q9Y324 198 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 TRIP11Q15643 1979 aa13.56□□□□□ -0.24
SYNGAP1-203ENST00000428982 LINC01553A4QN01 128 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 EVX1P49640 407 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 OR7E24Q6IFN5 339 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 RSPO2Q6UXX9 243 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 PNPLA1Q8N8W4 532 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 TM9SF4Q92544 642 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 CNOT9Q92600 299 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 OTUB2Q96DC9 234 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 TSSK6Q9BXA6 273 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 UNKLQ9H9P5 680 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 CLDND1Q9NY35 253 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 VNN3Q9NY84 501 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 IL17CQ9P0M4 197 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 HSPA12AO43301 675 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 SOCS5O75159 536 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 HSD3B1P14060 373 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 NME1P15531 152 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 EPCAMP16422 314 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 TMEM11P17152 192 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 HSD3B2P26439 372 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 HCCSP53701 268 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 MEDAGQ5VYS4 303 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 SUSD1Q6UWL2 747 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 CXXC5Q7LFL8 322 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 TMEM200AQ86VY9 491 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 FBLIM1Q8WUP2 373 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 CDCA4Q9BXL8 241 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 GABARAPL1Q9H0R8 117 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 VPS29Q9UBQ0 182 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 GRXCR1A8MXD5 290 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 PRKRAO75569 313 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 PRSS56P0CW18 603 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 MPC1LP0DKB6 136 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 TYRP14679 529 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 VEZF1Q14119 521 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 RSU1Q15404 277 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 CTSL3PQ5NE16 218 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 LAIR1Q6GTX8 287 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 B3GLCTQ6Y288 498 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 TRIM46Q7Z4K8 759 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 PIANPQ8IYJ0 282 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZNF383Q8NA42 475 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 MDGA1Q8NFP4 955 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 BSCL2Q96G97 398 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 IMP3Q9NV31 184 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 MT-ND4P03905 459 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 SPI1P17947 270 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 TSPAN7P41732 249 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 SERTAD2Q14140 314 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 HEPACAMQ14CZ8 416 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 TRAM1Q15629 374 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 MAJINQ3KP22 176 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 NAXDQ8IW45 347 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 C12orf76Q8N812 135 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 OR7G2Q8NG99 324 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 RHBDF1Q96CC6 855 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 WDR26Q9H7D7 661 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 WNT6Q9Y6F9 365 aa13.55□□□□□ -0.24
SYNGAP1-203ENST00000428982 IQCF5A8MTL0 148 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 PSMD9O00233 223 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 CHST10O43529 356 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 OR10H3O60404 316 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 CYTIPO60759 359 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 IFNA10P01566 189 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 SPARCP09486 303 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 POU3F2P20265 443 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 SLC6A1P30531 599 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 GNG10P50151 68 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 NFATC2Q13469 925 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 RBM39Q14498 530 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 GANABQ14697 944 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 GTDC1Q4AE62 458 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 KHDRBS2Q5VWX1 349 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms