RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PRRT2Q7Z6L0 340 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 CELF5Q8N6W0 485 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 OR4K1Q8NGD4 311 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 OSTF1Q92882 214 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 HPF1Q9NWY4 346 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 THSD7BQ9C0I4 1608 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 J3KTA2 159 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SUSD5O60279 629 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 TECTAO75443 2155 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 EPPINO95925 133 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 IGFBP1P08833 259 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 HMGA1P17096 107 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 RAB8AP61006 207 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 DOC2AQ14183 400 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 FAM182BQ5T319 152 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 WASH2PQ6VEQ5 465 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 ZBTB2Q8N680 514 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 DNAAF1Q8NEP3 725 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 OR4D11Q8NGI4 311 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 CEP76Q8TAP6 659 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SLC2A12Q8TD20 617 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 ZDHHC1Q8WTX9 485 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 C1orf198Q9H425 327 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 MTG2Q9H4K7 406 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 NEUROD4Q9HD90 331 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 INPP5EQ9NRR6 644 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SLC9B1P1A6NJY1 282 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PCP4L1A6NKN8 68 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 GATBO75879 557 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 NDUFB6O95139 128 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SLC25A14O95258 325 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 OPN1SWP03999 348 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PAX1P15863 534 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 NAAAQ02083 359 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 CHIT1Q13231 466 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 ZMYND11Q15326 602 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 ZNF284Q2VY69 593 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SFRP5Q5T4F7 317 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 FAM199XQ6PEV8 388 aaPredicted RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 SMARCD3Q6STE5 483 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 COMMD6Q7Z4G1 85 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 ADCK2Q7Z695 626 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SYT12Q8IV01 421 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 PUSL1Q8N0Z8 303 aaKnown RBP4.8□□□□□ -1.64
RIF1-203ENST00000428287 ZNF527Q8NB42 609 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 C15orf40Q8WUR7 153 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 SLC35A5Q9BS91 424 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 FBXL2Q9UKC9 423 aa4.8□□□□□ -1.64
RIF1-203ENST00000428287 TRBV6-7A0A0A0MS04 114 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DVL2O14641 736 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 B4GALT2O60909 372 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 CLDN11O75508 207 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 GUCA1CO95843 209 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 KLKB1P03952 638 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ATP1B1P05026 303 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MAT2AP31153 395 aaKnown RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 SELENOPP49908 381 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MRPS10P82664 201 aaKnown RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 ARF5P84085 180 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 CYP4F8P98187 520 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 HTR4Q13639 388 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 PLEKHS1Q5SXH7 462 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SERPINA9Q86WD7 417 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 APOBEC3FQ8IUX4 373 aaKnown RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 MISPQ8IVT2 679 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 OR6C4Q8NGE1 309 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ECHDC3Q96DC8 303 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ALG14Q96F25 216 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 BOCQ9BWV1 1114 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ENKD1Q9H0I2 346 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SIRT3Q9NTG7 399 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 ANTXRLA6NF34 631 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 C5orf58C9J3I9 102 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 WRBO00258 174 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 PGRMC2O15173 223 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 NME6O75414 186 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 SOX14O95416 240 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 HRGP04196 525 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 PTH2RP49190 550 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 CRYZQ08257 329 aaKnown RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 GCNT6Q5T4J0 391 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 OLFML2AQ68BL7 652 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 Q6ZTK2 550 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 LILRB2Q8N423 598 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 C12orf45Q8N5I9 185 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 SLC30A7Q8NEW0 376 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 OR14A16Q8NHC5 309 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 WDR13Q9H1Z4 485 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ANKRD10Q9NXR5 420 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 USP9YO00507 2555 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 ACSL4O60488 711 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ACTL6AO96019 429 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SYPP08247 313 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MMP3P08254 477 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 CD79BP40259 229 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 AP1S1P61966 158 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 FOXK2Q01167 660 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 LHFPL3Q86UP9 236 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SCN4BQ8IWT1 228 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms