RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 BDP1A6H8Y1 2624 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 GPR107Q5VW38 600 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 B3GNT6Q6ZMB0 384 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 PRSS48Q7RTY5 328 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 PLPP5Q8NEB5 264 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 FAR1Q8WVX9 515 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 ISOC1Q96CN7 298 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 ZNF559Q9BR84 538 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 FKBP14Q9NWM8 211 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 ASCC3Q8N3C0 2202 aaKnown RBP24.46■■□□□ 1.51
LDB1-202ENST00000425280 COL5A1P20908 1838 aaPredicted RBP24.46■■□□□ 1.51
LDB1-202ENST00000425280 SLC5A2P31639 672 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 MAP2K4P45985 399 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 MASP1P48740 699 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 TUBA3CQ13748 450 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 ANGPT1Q15389 498 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 CLPPQ16740 277 aaPredicted RBP24.46■■□□□ 1.51
LDB1-202ENST00000425280 WDR88Q6ZMY6 472 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 SHISA6Q6ZSJ9 500 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 OR4C3Q8NH37 302 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 OR14A16Q8NHC5 309 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 STT3BQ8TCJ2 826 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 GGHQ92820 318 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 NXF5Q9H1B4 397 aaKnown RBP24.46■■□□□ 1.51
LDB1-202ENST00000425280 DSN1Q9H410 356 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 EGLN3Q9H6Z9 239 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 C14orf105Q9NVL8 296 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 CFL2Q9Y281 166 aa24.46■■□□□ 1.51
LDB1-202ENST00000425280 IGLV3-12A0A075B6K2 115 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 CLCA1A8K7I4 914 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 KLF4O43474 513 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 ADAM11O75078 769 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 DCKP27707 260 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 FOXL2P58012 376 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 SNRPGP62308 76 aaKnown RBP24.45■■□□□ 1.5
LDB1-202ENST00000425280 NKAIN1Q4KMZ8 207 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 TCEAL6Q6IPX3 200 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 CASP12Q6UXS9 341 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 LSRQ86X29 649 aaPredicted RBP24.45■■□□□ 1.5
LDB1-202ENST00000425280 DAZLQ92904 295 aaKnown RBP24.45■■□□□ 1.5
LDB1-202ENST00000425280 TCEAL3Q969E4 200 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 EFHD2Q96C19 240 aaPredicted RBP24.45■■□□□ 1.5
LDB1-202ENST00000425280 IL4I1Q96RQ9 567 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 COPS4Q9BT78 406 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 PLA2G12AQ9BZM1 189 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 PTTG2Q9NZH5 202 aa24.45■■□□□ 1.5
LDB1-202ENST00000425280 D6RAR5 112 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 NTN3O00634 580 aaPredicted RBP24.44■■□□□ 1.5
LDB1-202ENST00000425280 POLR1CO15160 346 aaPredicted RBP24.44■■□□□ 1.5
LDB1-202ENST00000425280 INMTO95050 263 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 PTNP21246 168 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 FPR3P25089 353 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 MPLP40238 635 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 ACAA2P42765 397 aaKnown RBP24.44■■□□□ 1.5
LDB1-202ENST00000425280 GIPRP48546 466 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 GINS1Q14691 196 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 RASSF6Q6ZTQ3 369 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 LANCL3Q6ZV70 420 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 ADIPOR1Q96A54 375 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 ARRDC1-AS1Q9H2J1 176 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 APMAPQ9HDC9 416 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 CLN6Q9NWW5 311 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 OCIAD1Q9NX40 245 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 ZNF701M0R085 212 aaPredicted RBP24.44■■□□□ 1.5
LDB1-202ENST00000425280 ZGLP1P0C6A0 271 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 GPR4P46093 362 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 CDK5Q00535 292 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 ZSWIM7Q19AV6 140 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 ZNF613Q6PF04 617 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 POGLUT1Q8NBL1 392 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 LCORQ96JN0 433 aaPredicted RBP24.44■■□□□ 1.5
LDB1-202ENST00000425280 ART5Q96L15 291 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 TMEM27Q9HBJ8 222 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 FLRT3Q9NZU0 649 aa24.44■■□□□ 1.5
LDB1-202ENST00000425280 SH3D21A4FU49 640 aa24.43■■□□□ 1.5
LDB1-202ENST00000425280 FRG2CA6NGY1 282 aa24.43■■□□□ 1.5
LDB1-202ENST00000425280 ACSM5Q6NUN0 579 aa24.43■■□□□ 1.5
LDB1-202ENST00000425280 CMIPQ8IY22 773 aa24.43■■□□□ 1.5
LDB1-202ENST00000425280 TRUB1Q8WWH5 349 aaKnown RBP24.43■■□□□ 1.5
LDB1-202ENST00000425280 NAA50Q9GZZ1 169 aaKnown RBP24.43■■□□□ 1.5
LDB1-202ENST00000425280 GPR83Q9NYM4 423 aa24.43■■□□□ 1.5
LDB1-202ENST00000425280 SERINC4A6NH21 518 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 ZNF99A8MXY4 864 aaPredicted RBP24.42■■□□□ 1.5
LDB1-202ENST00000425280 IL33O95760 270 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 FADS2O95864 444 aaKnown RBP24.42■■□□□ 1.5
LDB1-202ENST00000425280 STAT5AP42229 794 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 GP2P55259 537 aaKnown RBP24.42■■□□□ 1.5
LDB1-202ENST00000425280 OCA2Q04671 838 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 FAAH2Q6GMR7 532 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 PPP1R3BQ86XI6 285 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 C9orf40Q8IXQ3 194 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 SVOPQ8N4V2 548 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 OR8D4Q8NGM9 314 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 ZNF420Q8TAQ5 688 aaPredicted RBP24.42■■□□□ 1.5
LDB1-202ENST00000425280 MYDGFQ969H8 173 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 SLC35B4Q969S0 331 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 SLC25A19Q9HC21 320 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 TVP23BQ9NYZ1 205 aa24.42■■□□□ 1.5
LDB1-202ENST00000425280 ZNF223Q9UK11 482 aaPredicted RBP24.42■■□□□ 1.5
LDB1-202ENST00000425280 DMDP11532 3685 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms