RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 DIO2Q92813 273 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 OR2A7Q96R45 310 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 TBX5Q99593 518 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 PTPN18Q99952 460 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 SEC22CQ9BRL7 303 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 HRASLSQ9HDD0 168 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 SEMA4GQ9NTN9 838 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 CPNE7Q9UBL6 633 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 OR5K4A6NMS3 321 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 RTCAO00442 366 aaKnown RBP9.98□□□□□ -0.81
USP54-204ENST00000422491 KLF4O43474 513 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 KCNJ13O60928 360 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 SAGP10523 405 aaPredicted RBP9.98□□□□□ -0.81
USP54-204ENST00000422491 RAB3BP20337 219 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 S100A11P31949 105 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 STAT5AP42229 794 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 RAP2BP61225 183 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 CRHR2Q13324 411 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 TRAM2Q15035 370 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 TRAM1Q15629 374 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 PIP5KL1Q5T9C9 394 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 OR5M10Q6IEU7 315 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 ZNF620Q6ZNG0 422 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 CXXC5Q7LFL8 322 aaKnown RBP9.98□□□□□ -0.81
USP54-204ENST00000422491 HSD11B1LQ7Z5J1 315 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 NAXDQ8IW45 347 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 ZFPM2Q8WW38 1151 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 EXOSC8Q96B26 276 aaKnown RBP9.98□□□□□ -0.81
USP54-204ENST00000422491 MRPS24Q96EL2 167 aaKnown RBP9.98□□□□□ -0.81
USP54-204ENST00000422491 SLC35G5Q96KT7 338 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 PGLYRP3Q96LB9 341 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 SLC22A12Q96S37 553 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 ORAI3Q9BRQ5 295 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 OR10A4Q9H209 315 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 TTYH1Q9H313 450 aaPredicted RBP9.98□□□□□ -0.81
USP54-204ENST00000422491 IFT22Q9H7X7 185 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 HPF1Q9NWY4 346 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 TEX10Q9NXF1 929 aaPredicted RBP9.98□□□□□ -0.81
USP54-204ENST00000422491 H2AFY2Q9P0M6 372 aaPredicted RBP9.98□□□□□ -0.81
USP54-204ENST00000422491 HCSTQ9UBK5 93 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 IL20RAQ9UHF4 553 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 ZMIZ1Q9ULJ6 1067 aa9.98□□□□□ -0.81
USP54-204ENST00000422491 ZC3H12DA2A288 527 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 RP2O75695 350 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 RB1P06400 928 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 GABRA1P14867 456 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 GJA1P17302 382 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 CD70P32970 193 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 RAD52P43351 418 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 PRLHRP49683 370 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 SLC3A1Q07837 685 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 FAM26DQ5JW98 314 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 ELFN2Q5R3F8 820 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 BAIAP2L2Q6UXY1 529 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 GLDNQ6ZMI3 551 aaPredicted RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 Q6ZNB5 142 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 Q6ZVL8 140 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 TEX19Q8NA77 164 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 PIGXQ8TBF5 258 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 CAMK1GQ96NX5 476 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 USB1Q9BQ65 265 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 IFT27Q9BW83 186 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 TEX12Q9BXU0 123 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 QRSL1Q9H0R6 528 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 MRPL15Q9P015 296 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 ABRACLQ9P1F3 81 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 TRPC4Q9UBN4 977 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 RCE1Q9Y256 329 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 PLXNA2O75051 1894 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 H7C4K7 107 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 ARPC1BO15143 372 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 FRS3O43559 492 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 ITGA10O75578 1167 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 GATBO75879 557 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 EPXP11678 715 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 HOXB1P14653 301 aaPredicted RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 IFNGR1P15260 489 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 PAICSP22234 425 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 BSGP35613 385 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 AHRP35869 848 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 GPR4P46093 362 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 PUS10Q3MIT2 529 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 NIPAL3Q6P499 406 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 ZNF454Q8N9F8 522 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 KCT2Q8NC54 265 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 SUN3Q8TAQ9 357 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 SP7Q8TDD2 431 aaPredicted RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 PIGKQ92643 395 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 KAT2AQ92830 837 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 KLK6Q92876 244 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 PINK1Q9BXM7 581 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 SAV1Q9H4B6 383 aaPredicted RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 MTG2Q9H4K7 406 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 ZDHHC6Q9H6R6 413 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 PLEKHA1Q9HB21 404 aa9.97□□□□□ -0.81
USP54-204ENST00000422491 EXOSC3Q9NQT5 275 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 GPR55Q9Y2T6 319 aaPredicted RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 CPSF4LA6NMK7 179 aaKnown RBP9.97□□□□□ -0.81
USP54-204ENST00000422491 MPTX1A8MV57 137 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms