RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 ZNF385CQ66K41 422 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 B3GNT6Q6ZMB0 384 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 ZNF550Q7Z398 422 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 PRICKLE2Q7Z3G6 844 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 MRGPREQ86SM8 312 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 OR8J1Q8NGP2 316 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 ADIPOR1Q96A54 375 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 ERVK-18Q9QC07 812 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 CTSFQ9UBX1 484 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 MRTO4Q9UKD2 239 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 MKL2Q9ULH7 1088 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 NTNG1Q9Y2I2 539 aa17.42■□□□□ 0.38
RBFOX1-204ENST00000422070 CYC1P08574 325 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 FGF5P12034 268 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 MPLP40238 635 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 RFX3P48380 749 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 EMX1Q04741 257 aaPredicted RBP17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 IL11RAQ14626 422 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 ANGPT1Q15389 498 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 NKAIN1Q4KMZ8 207 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 CASP12Q6UXS9 341 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 PPP1R3BQ86XI6 285 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 POGLUT1Q8NBL1 392 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 C17orf47Q8NEP4 570 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 WDR36Q8NI36 951 aaKnown RBP17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 STT3BQ8TCJ2 826 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 CNOT9Q92600 299 aaKnown RBP17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 MYDGFQ969H8 173 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 LCORQ96JN0 433 aaPredicted RBP17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 Q96MT0 163 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 TRIM2Q9C040 744 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 OR8D2Q9GZM6 311 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 CNOT2Q9NZN8 540 aaKnown RBP17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 SLC35A3Q9Y2D2 325 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 ZDBF2Q9HCK1 2354 aa17.41■□□□□ 0.38
RBFOX1-204ENST00000422070 A0A0B4J2E0 115 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 A0A1B0GX12 115 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 TO15178 435 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 BCAS1O75363 584 aaPredicted RBP17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 TIAF1O95411 115 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 GKN3PP0CG01 181 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 ACAA2P42765 397 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 GRK6P43250 576 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 GIPRP48546 466 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 SMSP52788 366 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 PIGFQ07326 219 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 EBPQ15125 230 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 PWWP2BQ6NUJ5 590 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 PTCHD4Q6ZW05 846 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 CLVS1Q8IUQ0 354 aaPredicted RBP17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 SLC38A9Q8NBW4 561 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 OR1N1Q8NGS0 311 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 TMEM255BQ8WV15 326 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 FAR1Q8WVX9 515 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 ISOC1Q96CN7 298 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 COPS4Q9BT78 406 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 GTPBP2Q9BX10 602 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 POLDIP3Q9BY77 421 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 CCDC90BQ9GZT6 254 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 SYNDIG1Q9H7V2 258 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 TMEM27Q9HBJ8 222 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 C11orf16Q9NQ32 467 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 CLN6Q9NWW5 311 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 COPS7AQ9UBW8 275 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 FER1L5A0AVI2 2057 aa17.4■□□□□ 0.38
RBFOX1-204ENST00000422070 SERINC4A6NH21 518 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 EFCAB7A8K855 629 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 CHP2O43745 196 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ZGLP1P0C6A0 271 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ACVR2AP27037 513 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 DCDP81605 110 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 OCA2Q04671 838 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ZFP36L1Q07352 338 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 KLHL26Q53HC5 615 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 AHSA2Q719I0 299 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 KIF18BQ86Y91 864 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 NRMQ8IXM6 262 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF440Q8IYI8 595 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF321PQ8N8H1 164 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF527Q8NB42 609 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 FAM71CQ8NEG0 241 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 TEX47Q8TBZ9 253 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 FCGR1BQ92637 280 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 NMD3Q96D46 503 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 FAM46AQ96IP4 442 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 MPP4Q96JB8 637 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 HS6ST2Q96MM7 605 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF426Q9BUY5 554 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 PRRG3Q9BZD7 231 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 LHPPQ9H008 270 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 UBQLN4Q9NRR5 601 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 IL20Q9NYY1 176 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ZNF223Q9UK11 482 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 VSTM2BA6NLU5 285 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 MT-ND2P03891 347 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 CDK1P06493 297 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 IGFBP1P08833 259 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 PIPP12273 146 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 ACP1P24666 158 aa17.39■□□□□ 0.37
RBFOX1-204ENST00000422070 AVPR2P30518 371 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms