RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TMEM207Q6UWW9 146 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 LINC00696Q6ZRV3 163 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 PRSS41Q7RTY9 318 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 THOC6Q86W42 341 aaKnown RBP4.91□□□□□ -1.62
LINC00342-201ENST00000412393 ARMC8Q8IUR7 673 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 LIX1LQ8IVB5 337 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 DDIASQ8IXT1 998 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 CLYBLQ8N0X4 340 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 NKAPQ8N5F7 415 aaKnown RBP4.91□□□□□ -1.62
LINC00342-201ENST00000412393 TBC1D19Q8N5T2 526 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 DPP10Q8N608 796 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 CELF2-AS1Q8N7Q2 184 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 MFSD9Q8NBP5 474 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 OR4K1Q8NGD4 311 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 OR51Q1Q8NH59 317 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 DNAJB14Q8TBM8 379 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 BRIX1Q8TDN6 353 aaKnown RBP4.91□□□□□ -1.62
LINC00342-201ENST00000412393 GIMAP1Q8WWP7 306 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 SLC13A3Q8WWT9 602 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 SLC5A11Q8WWX8 675 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 METTL21AQ8WXB1 218 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 PSMF1Q92530 271 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 C19orf60Q96EN9 201 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 VPS39Q96JC1 886 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 C16orf92Q96LL3 132 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 TSNARE1Q96NA8 513 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 OR4K3Q96R72 315 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 NPAS2Q99743 824 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 EGFL8Q99944 293 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 SHCBP1LQ9BZQ2 653 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 NXF2Q9GZY0 626 aaKnown RBP4.91□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF700Q9H0M5 742 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 PCDHAC1Q9H158 963 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 MMP27Q9H306 513 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 DUSP21Q9H596 190 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 IPPKQ9H8X2 491 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 GORASP2Q9H8Y8 452 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 SIAEQ9HAT2 523 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 IL20Q9NYY1 176 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 HCN3Q9P1Z3 774 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 IKZF3Q9UKT9 509 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 NTNG1Q9Y2I2 539 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 AP3M1Q9Y2T2 418 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 N6AMT1Q9Y5N5 214 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 CSAG2Q9Y5P2 127 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 SLC22A7Q9Y694 548 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 HECTD1Q9ULT8 2610 aa4.91□□□□□ -1.62
LINC00342-201ENST00000412393 POLEQ07864 2286 aa4.9□□□□□ -1.62
LINC00342-201ENST00000412393 FLNCQ14315 2725 aa4.9□□□□□ -1.62
LINC00342-201ENST00000412393 IGHV3-20A0A0C4DH32 117 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 RNF103-CHMP3A0A140T963 221 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 A0A1W2PP18 115 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ANKUB1A6NFN9 424 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF860A6NHJ4 632 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CLDN24A6NM45 220 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CYSRT1A8MQ03 144 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CDC7O00311 574 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 NME4O00746 187 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 NDUFS4O43181 175 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 RDH16O75452 317 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 TIPRLO75663 272 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 MYO1DO94832 1006 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 MPIG6BO95866 241 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 PTTG1O95997 202 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CELA2AP08217 269 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CYC1P08574 325 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 TRAPPC2P0DI81 140 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 TRAPPC2BP0DI82 140 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ITGAMP11215 1152 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 GP1BBP13224 206 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ICAM2P13598 275 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 TCN1P20061 433 aaPredicted RBP4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ATP6V1B2P21281 511 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 S100A5P33763 92 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 AHRP35869 848 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 OPRL1P41146 370 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 TSFMP43897 325 aaKnown RBP4.9□□□□□ -1.63
LINC00342-201ENST00000412393 PCYT1AP49585 367 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 AGTR2P50052 363 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 EFNA3P52797 238 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ISL1P61371 349 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SKP1P63208 163 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ARG2P78540 354 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 REEP5Q00765 189 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 IFITM3Q01628 133 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 IFITM2Q01629 132 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 MEF2AQ02078 507 aaPredicted RBP4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF45Q02386 682 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 EMX2Q04743 252 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 DAG1Q14118 895 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 PPP1R3AQ16821 1122 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 DGUOKQ16854 277 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 AGKQ53H12 422 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 TOR1AIP1Q5JTV8 583 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ABHD17BQ5VST6 288 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 TMEM198Q66K66 360 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 B3GNTL1Q67FW5 361 aaPredicted RBP4.9□□□□□ -1.63
LINC00342-201ENST00000412393 LANCL3Q6ZV70 420 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SPATA19Q7Z5L4 167 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CPEB2Q7Z5Q1 589 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms