RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TAS2R10Q9NYW0 307 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 ARMCX1Q9P291 453 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 SH3BGRL2Q9UJC5 107 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 A0A1B0GUH1 482 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 WIPF3A6NGB9 483 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 PRRG2O14669 202 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 BCKDKO14874 412 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 RNF224P0DH78 156 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 BMP7P18075 431 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 MSX1P28360 303 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 GFRA1P56159 465 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 ZNF117Q03924 483 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 DCST1Q5T197 706 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 CPLX4Q7Z7G2 160 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 DHDDSQ86SQ9 333 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 FJX1Q86VR8 437 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 OR14L1PQ8NHC6 308 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 PHOSPHO1Q8TCT1 267 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 SLC38A5Q8WUX1 472 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 OIT3Q8WWZ8 545 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 TIMP4Q99727 224 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 UGT2B28Q9BY64 529 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 NSRP1Q9H0G5 558 aaKnown RBP20.29■□□□□ 0.84
PTCD3-203ENST00000409783 RAD21L1Q9H4I0 556 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 HHATLQ9HCP6 504 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 DKKL1Q9UK85 242 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 CAPN7Q9Y6W3 813 aa20.29■□□□□ 0.84
PTCD3-203ENST00000409783 LRRK2Q5S007 2527 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 NCOA6Q14686 2063 aaPredicted RBP20.28■□□□□ 0.84
PTCD3-203ENST00000409783 SERINC4A6NH21 518 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 LDLRP01130 860 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 NR2F1P10589 423 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 GPX2P18283 190 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 PPIBP23284 216 aaKnown RBP20.28■□□□□ 0.84
PTCD3-203ENST00000409783 ADH7P40394 386 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 GANABQ14697 944 aaKnown RBP20.28■□□□□ 0.84
PTCD3-203ENST00000409783 ZNF630Q2M218 657 aaPredicted RBP20.28■□□□□ 0.84
PTCD3-203ENST00000409783 COQ5Q5HYK3 327 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 CBLN3Q6UW01 205 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 PIGWQ7Z7B1 504 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 SNX32Q86XE0 403 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 OR5M9Q8NGP3 310 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 SH3YL1Q96HL8 342 aaPredicted RBP20.28■□□□□ 0.84
PTCD3-203ENST00000409783 ANKRD27Q96NW4 1050 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 CGREF1Q99674 301 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 CCDC106Q9BWC9 280 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 QRSL1Q9H0R6 528 aaKnown RBP20.28■□□□□ 0.84
PTCD3-203ENST00000409783 MYLK2Q9H1R3 596 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 PTGES2Q9H7Z7 377 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 P2RX2Q9UBL9 471 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 ICAM5Q9UMF0 924 aa20.28■□□□□ 0.84
PTCD3-203ENST00000409783 DSPPQ9NZW4 1301 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 PHF3Q92576 2039 aaKnown RBP20.27■□□□□ 0.84
PTCD3-203ENST00000409783 C15orf38-AP3S2A0A0A6YYH1 394 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 CCL21O00585 134 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 GMFGO60234 142 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 CCDC22O60826 627 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 AGFG2O95081 481 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 HK1P19367 917 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 RPS4Y1P22090 263 aaKnown RBP20.27■□□□□ 0.84
PTCD3-203ENST00000409783 CASP6P55212 293 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 PLAURQ03405 335 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 NFYCQ13952 458 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 SELPLGQ14242 412 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 FGFBP1Q14512 234 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 TMEM44Q2T9K0 475 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 NDUFAF6Q330K2 333 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 ARSKQ6UWY0 536 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 C3P1Q6ZMU1 363 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 HMGN2P46Q86SG4 172 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 MTDHQ86UE4 582 aaKnown RBP20.27■□□□□ 0.84
PTCD3-203ENST00000409783 IFNEQ86WN2 208 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 ZNF614Q8N883 585 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 B4GALNT2Q8NHY0 566 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 DTNBP1Q96EV8 351 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 DMRTA2Q96SC8 542 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 TRIM8Q9BZR9 551 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 A4GALTQ9NPC4 353 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 THUMPD1Q9NXG2 353 aaKnown RBP20.27■□□□□ 0.84
PTCD3-203ENST00000409783 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.27■□□□□ 0.84
PTCD3-203ENST00000409783 ACAD8Q9UKU7 415 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 CARD8Q9Y2G2 431 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 RPH3AQ9Y2J0 694 aaPredicted RBP20.27■□□□□ 0.84
PTCD3-203ENST00000409783 MEMO1Q9Y316 297 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 L3MBTL1Q9Y468 752 aa20.27■□□□□ 0.84
PTCD3-203ENST00000409783 PCNX1Q96RV3 2341 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 LOC100653049A0A140TA62 436 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 AGAP5A6NIR3 686 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 H3BNH8 94 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 FXYD1O00168 92 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 HCRTR2O43614 444 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 BCAS1O75363 584 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-203ENST00000409783 KRT34O76011 436 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 ACTL6AO96019 429 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 BCHEP06276 602 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 TCEA1P23193 301 aaKnown RBP20.26■□□□□ 0.83
PTCD3-203ENST00000409783 HPCAP84074 193 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 MAPRE2Q15555 327 aa20.26■□□□□ 0.83
PTCD3-203ENST00000409783 GLYR1Q49A26 553 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-203ENST00000409783 REP15Q6BDI9 236 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms