RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SPRP35270 261 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 UGT1A3P35503 534 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 UGT1A5P35504 534 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TRIM23P36406 574 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 NSG1P42857 185 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 PTGER3P43115 390 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 CXCL12P48061 93 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TTPAP49638 278 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 PRLHRP49683 370 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 SERPINB8P50452 374 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 CCR3P51677 355 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 SLC18A1P54219 525 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TAS2R39P59534 338 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 MAGOHP61326 146 aaKnown RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 LGALS3BPQ08380 585 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 IRF4Q15306 451 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 ZNF658BQ4V348 819 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 ZRANB3Q5FWF4 1079 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TMEM31Q5JXX7 168 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 GPRC6AQ5T6X5 926 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 LGSNQ5TDP6 509 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 LYPLAL1Q5VWZ2 237 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 KCTD16Q68DU8 428 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 FAM45BPQ6NSW5 357 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 PNCKQ6P2M8 343 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 ARHGAP11AQ6P4F7 1023 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TMEM207Q6UWW9 146 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 MACC1Q6ZN28 852 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 CDHR3Q6ZTQ4 885 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 ZNF554Q86TJ5 538 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 LINC00346Q8IVM7 164 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 MAML2Q8IZL2 1156 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 DCLK2Q8N568 766 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 BANPQ8N9N5 519 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 DENND6BQ8NEG7 585 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 OR2AJ1Q8NGZ0 328 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 FAM45AQ8TCE6 357 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 LKAAEAR1Q8TD35 194 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 ACMSDQ8TDX5 336 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 RNF128Q8TEB7 428 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 HEXDCQ8WVB3 486 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 GLYATL1Q969I3 302 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.82□□□□□ -1.8
CLK1-203ENST00000409769 ULK4Q96C45 1275 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 AP2M1Q96CW1 435 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TMCO6Q96DC7 493 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 ARSGQ96EG1 525 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 NDNQ99608 321 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 OLFM1Q99784 485 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 RHNO1Q9BSD3 238 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 SPATA16Q9BXB7 569 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 SLC17A9Q9BYT1 436 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 STMN4Q9H169 189 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 DPAGT1Q9H3H5 408 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 FAM96AQ9H5X1 160 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 CAB39LQ9H9S4 337 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 POPDC3Q9HBV1 291 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 SENP1Q9P0U3 644 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 CRNNQ9UBG3 495 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 CRLS1Q9UJA2 301 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 NCKAP1Q9Y2A7 1128 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 IKBKGQ9Y6K9 419 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TMEM221A6NGB7 291 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GOLGA6L10A6NI86 522 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 A6NL46 340 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 IQCF5A8MTL0 148 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GPR89AB7ZAQ6 455 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 H3BMM5 538 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GOLGA8RI6L899 631 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 M0R296 226 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 PFDN6O15212 129 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 NIPSNAP2O75323 286 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 MTX2O75431 263 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 SNRNP200O75643 2136 aaKnown RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 AP2A2O94973 939 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 EML2O95834 649 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 TSPAN12O95859 305 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 WDPCPO95876 746 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 MT-ND3P03897 115 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 C2P06681 752 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 HOXC4P09017 264 aaPredicted RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 DANCRP0C864 163 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GPR89BP0CG08 455 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 FAM157CP0CG43 387 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 SLC35E2BP0CK96 405 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 ACP2P11117 423 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 ATP1B2P14415 290 aaPredicted RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 STMN1P16949 149 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 EFNA1P20827 205 aaPredicted RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 OAS2P29728 719 aaKnown RBP3.81□□□□□ -1.8
CLK1-203ENST00000409769 CHRNB4P30926 498 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 NUDT1P36639 197 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 SLC26A3P40879 764 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 GPR1P46091 355 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 CDKN2DP55273 166 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 KIAA1024LP59773 190 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 KRTAP10-3P60369 221 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 PFN3P60673 137 aa3.81□□□□□ -1.8
CLK1-203ENST00000409769 RAB10P61026 200 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms