RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MMACHCQ9Y4U1 282 aa19.15■□□□□ 0.66
USP39-203ENST00000409470 CCDC163A0A0D9SF12 145 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 EFCAB9A8MZ26 197 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 AIREO43918 545 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 CSTF2P33240 577 aaKnown RBP eCLIP19.14■□□□□ 0.65
USP39-203ENST00000409470 CLK1P49759 484 aaKnown RBP19.14■□□□□ 0.65
USP39-203ENST00000409470 EFNB1P98172 346 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 PLAURQ03405 335 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 SLC30A6Q6NXT4 461 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 WDR74Q6RFH5 385 aaPredicted RBP19.14■□□□□ 0.65
USP39-203ENST00000409470 ZNF620Q6ZNG0 422 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 SLC46A3Q7Z3Q1 461 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 PRSS42Q7Z5A4 293 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 MRGPREQ86SM8 312 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 RNF113BQ8IZP6 322 aaKnown RBP19.14■□□□□ 0.65
USP39-203ENST00000409470 SLC34A3Q8N130 599 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 GRHL3Q8TE85 626 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 CLIP3Q96DZ5 547 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 OR1F2PQ96R84 312 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 OR5M11Q96RB7 305 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 NUDT22Q9BRQ3 303 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 IL20Q9NYY1 176 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 ERGIC3Q9Y282 383 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 GPR52Q9Y2T5 361 aa19.14■□□□□ 0.65
USP39-203ENST00000409470 HOXA6P31267 233 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 MLLT10P55197 1068 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 ZNF613Q6PF04 617 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 MAMSTRQ6ZN01 415 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 SLCO6A1Q86UG4 719 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 KMT5CQ86Y97 462 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 CYP4Z2PQ8N1L4 340 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 PFN4Q8NHR9 129 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 PLGRKTQ9HBL7 147 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 SEMA5BQ9P283 1151 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 CDH10Q9Y6N8 788 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 TTC36A6NLP5 189 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 SNTNA6NMZ2 147 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 A8MUA0 341 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 KPNA4O00629 521 aaPredicted RBP19.13■□□□□ 0.65
USP39-203ENST00000409470 CDC42EP2O14613 210 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 LYPD3O95274 346 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 CH25HO95992 272 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 PDGFBP01127 241 aaPredicted RBP19.13■□□□□ 0.65
USP39-203ENST00000409470 IFI30P13284 250 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 FBLP22087 321 aaKnown RBP19.13■□□□□ 0.65
USP39-203ENST00000409470 GADD45AP24522 165 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 PSMD4P55036 377 aaKnown RBP19.13■□□□□ 0.65
USP39-203ENST00000409470 ZNF141Q15928 474 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 MOGQ16653 247 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 LSRQ86X29 649 aaPredicted RBP19.13■□□□□ 0.65
USP39-203ENST00000409470 GRAMD2AQ8IUY3 354 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 BCORP1Q8N888 145 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 OR7G1Q8NGA0 311 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 SENP5Q96HI0 755 aaPredicted RBP19.13■□□□□ 0.65
USP39-203ENST00000409470 PLEKHA8Q96JA3 519 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 DPH1Q9BZG8 443 aa19.13■□□□□ 0.65
USP39-203ENST00000409470 DNAJB12Q9NXW2 375 aaKnown RBP19.13■□□□□ 0.65
USP39-203ENST00000409470 UNC119BA6NIH7 251 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 DYRK3O43781 588 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 EPHA8P29322 1005 aaPredicted RBP19.12■□□□□ 0.65
USP39-203ENST00000409470 RGS6P49758 472 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 ATP12AP54707 1039 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 DSG2Q14126 1118 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 PMS2CLQ68D20 193 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 CDK20Q8IZL9 346 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 OR4Q3Q8NH05 313 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 PTPMT1Q8WUK0 201 aaPredicted RBP19.12■□□□□ 0.65
USP39-203ENST00000409470 FGF11Q92914 225 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 TSLPQ969D9 159 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 MGLLQ99685 303 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 DPYSL5Q9BPU6 564 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 DUSP23Q9BVJ7 150 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 ZNF304Q9HCX3 659 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 ENAMQ9NRM1 1142 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 IL20RAQ9UHF4 553 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 ZNF223Q9UK11 482 aaPredicted RBP19.12■□□□□ 0.65
USP39-203ENST00000409470 CLPSP04118 112 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 CKMT1AP12532 417 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 FGFBP1Q14512 234 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 DGUOKQ16854 277 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 ARHGAP22Q7Z5H3 698 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 TMEM151BQ8IW70 566 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 ZHX1-C8orf76Q96EF9 292 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 SAMD8Q96LT4 415 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 FGF21Q9NSA1 209 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 CLEC2DQ9UHP7 191 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 MED31Q9Y3C7 131 aa19.12■□□□□ 0.65
USP39-203ENST00000409470 ARID1BQ8NFD5 2236 aaPredicted RBP19.11■□□□□ 0.65
USP39-203ENST00000409470 CPED1A4D0V7 1026 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 PRODHO43272 600 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 RPLP0P05388 317 aaKnown RBP19.11■□□□□ 0.65
USP39-203ENST00000409470 MAKP20794 623 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 PRKCDQ05655 676 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 ZSWIM7Q19AV6 140 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 PGGHGQ32M88 737 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 ARHGAP40Q5TG30 622 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 C1orf189Q5VU69 101 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 QSOX2Q6ZRP7 698 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 WDR5BQ86VZ2 330 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 CLDN22Q8N7P3 220 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms