RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 BCHEP06276 602 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 NUDT7P0C024 238 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 DPP4P27487 766 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 MSX1P28360 303 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 CRISP3P54108 245 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 KCNC4Q03721 635 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 GNA13Q14344 377 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 ZNF630Q2M218 657 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-202ENST00000409326 WIPI1Q5MNZ9 446 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-202ENST00000409326 YRDCQ86U90 279 aaKnown RBP18.45■□□□□ 0.54
PTCD3-202ENST00000409326 C10orf111Q8N326 155 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 PHOSPHO1Q8TCT1 267 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 PMM1Q92871 262 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 A4GALTQ9NPC4 353 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 TAS2R10Q9NYW0 307 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 SPRR3Q9UBC9 169 aa18.45■□□□□ 0.54
PTCD3-202ENST00000409326 SERINC4A6NH21 518 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 FAM107AO95990 144 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 NPPAP01160 153 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 CAPRIN1Q14444 709 aaKnown RBP18.44■□□□□ 0.54
PTCD3-202ENST00000409326 MAPK14Q16539 360 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 GCNT6Q5T4J0 391 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 TREML1Q86YW5 311 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 POU5F2Q8N7G0 328 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 PCYOX1LQ8NBM8 494 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 OR14L1PQ8NHC6 308 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 FAM57AQ8TBR7 257 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 SARAFQ96BY9 339 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 C1GALT1C1Q96EU7 318 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 TMEM19Q96HH6 336 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 QRSL1Q9H0R6 528 aaKnown RBP18.44■□□□□ 0.54
PTCD3-202ENST00000409326 SUCOQ9UBS9 1254 aaKnown RBP18.44■□□□□ 0.54
PTCD3-202ENST00000409326 MYO7BQ6PIF6 2116 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 DSPPQ9NZW4 1301 aa18.44■□□□□ 0.54
PTCD3-202ENST00000409326 DIDO1Q9BTC0 2240 aaKnown RBP18.43■□□□□ 0.54
PTCD3-202ENST00000409326 NPIPA2E9PIF3 369 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 NPIPA3F8WFD2 350 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 FXYD1O00168 92 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 PRRG2O14669 202 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 BCKDKO14874 412 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 HCRTR2O43614 444 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 ZIC3O60481 467 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 TPOP07202 933 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 COX4I1P13073 169 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 RPS4Y1P22090 263 aaKnown RBP18.43■□□□□ 0.54
PTCD3-202ENST00000409326 ADH7P40394 386 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 CA7P43166 264 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 RNF144AP50876 292 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-202ENST00000409326 CASP6P55212 293 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 MTPNP58546 118 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 ZNF117Q03924 483 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 SELPLGQ14242 412 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 FGFBP1Q14512 234 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 C3AR1Q16581 482 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 NHSL2Q5HYW2 709 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 IFNEQ86WN2 208 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 B4GALNT2Q8NHY0 566 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 MAL2Q969L2 176 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 LRRC58Q96CX6 371 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 ZG16BQ96DA0 208 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 SH3YL1Q96HL8 342 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-202ENST00000409326 TREX2Q9BQ50 279 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-202ENST00000409326 TRIM8Q9BZR9 551 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 MTHFD2LQ9H903 347 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-202ENST00000409326 SLC6A5Q9Y345 797 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 L3MBTL1Q9Y468 752 aa18.43■□□□□ 0.54
PTCD3-202ENST00000409326 PHF3Q92576 2039 aaKnown RBP18.43■□□□□ 0.54
PTCD3-202ENST00000409326 ARHGAP21Q5T5U3 1957 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 C15orf38-AP3S2A0A0A6YYH1 394 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 TRGV8A0A0C4DH27 118 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 AGAP5A6NIR3 686 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 ZNF264O43296 627 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 GMFGO60234 142 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 ARAFP10398 606 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 UBL4AP11441 157 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 GCKP35557 465 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 SUMO3P55854 103 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-202ENST00000409326 CRYZQ08257 329 aaKnown RBP18.42■□□□□ 0.54
PTCD3-202ENST00000409326 PRAMEF8Q5VWM4 474 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 C1QL3Q5VWW1 255 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 PRAMEF7Q5VXH5 474 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 CBLN3Q6UW01 205 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 CD163Q86VB7 1156 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 METTL25Q8N6Q8 603 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 ANKS4BQ8N8V4 417 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 RCN3Q96D15 328 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 SLC39A3Q9BRY0 314 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 THUMPD3Q9BV44 507 aaKnown RBP18.42■□□□□ 0.54
PTCD3-202ENST00000409326 TMEM38AQ9H6F2 299 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 BCL2L10Q9HD36 194 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 GID8Q9NWU2 228 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 TNFRSF10DQ9UBN6 386 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 TINAGQ9UJW2 476 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 ICAM5Q9UMF0 924 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 SLC35A3Q9Y2D2 325 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 CARD8Q9Y2G2 431 aa18.42■□□□□ 0.54
PTCD3-202ENST00000409326 A0A0G2JPF8 293 aa18.41■□□□□ 0.54
PTCD3-202ENST00000409326 A0A1B0GUH1 482 aa18.41■□□□□ 0.54
PTCD3-202ENST00000409326 HNRNPCL2B2RXH8 293 aa18.41■□□□□ 0.54
PTCD3-202ENST00000409326 HNRNPCL3B7ZW38 293 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms