RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CHN1P15882 459 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 STX2P32856 288 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 NAB1Q13506 487 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 HEPACAMQ14CZ8 416 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 PLPPR5Q32ZL2 321 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 TDRPQ86YL5 185 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 LILRA2Q8N149 483 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 PLD6Q8N2A8 252 aaKnown RBP14.76□□□□□ -0.05
CHMP3-203ENST00000409225 POC1BQ8TC44 478 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 PROX1Q92786 737 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 MUCL1Q96DR8 90 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 SH3YL1Q96HL8 342 aaPredicted RBP14.76□□□□□ -0.05
CHMP3-203ENST00000409225 EML4Q9HC35 981 aaKnown RBP14.76□□□□□ -0.05
CHMP3-203ENST00000409225 DDX18Q9NVP1 670 aaKnown RBP14.76□□□□□ -0.05
CHMP3-203ENST00000409225 POU2F3Q9UKI9 436 aa14.76□□□□□ -0.05
CHMP3-203ENST00000409225 C7orf72A4D263 438 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 UPK1AO00322 258 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 SMIM24O75264 130 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 OR4F21O95013 312 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 TYK2P29597 1187 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 GABRA3P34903 492 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 CDH13P55290 713 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 SLC18A2Q05940 514 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 SPOCK1Q08629 439 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 PRSS53Q2L4Q9 553 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 UBAP2Q5T6F2 1119 aaKnown RBP14.75□□□□□ -0.05
CHMP3-203ENST00000409225 Q6ZSR9 355 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 FCRLAQ7L513 359 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 CREG2Q8IUH2 290 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 FBXL14Q8N1E6 418 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 MUC15Q8N387 334 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 CDC26Q8NHZ8 85 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 PIK3R3Q92569 461 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 CPNE4Q96A23 557 aaPredicted RBP14.75□□□□□ -0.05
CHMP3-203ENST00000409225 DHRS9Q9BPW9 319 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 KLHDC3Q9BQ90 382 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 LMF2Q9BU23 707 aaKnown RBP14.75□□□□□ -0.05
CHMP3-203ENST00000409225 EBPLQ9BY08 206 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 TIGARQ9NQ88 270 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 PRSS50Q9UI38 385 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 TMCO1Q9UM00 188 aa14.75□□□□□ -0.05
CHMP3-203ENST00000409225 MYO1GB0I1T2 1018 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 ALG1L2C9J202 215 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 MANBAO00462 879 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 KIAA0513O60268 411 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 LY6HO94772 140 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 PRKD3O94806 890 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 KCNH1O95259 989 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 PSMG1O95456 288 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 YES1P07947 543 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 RPS17P08708 135 aaKnown RBP14.74□□□□□ -0.05
CHMP3-203ENST00000409225 SERPINB8P50452 374 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 FABP6P51161 128 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 GGTLC2Q14390 218 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 SQLEQ14534 574 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 UAP1Q16222 522 aaPredicted RBP14.74□□□□□ -0.05
CHMP3-203ENST00000409225 SLC22A25Q6T423 547 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 C12orf54Q6X4T0 127 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 Q6ZT83 130 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 TRABD2AQ86V40 505 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 OR2L13Q8N349 312 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 ZNF483Q8TF39 744 aaPredicted RBP14.74□□□□□ -0.05
CHMP3-203ENST00000409225 MSI2Q96DH6 328 aaKnown RBP14.74□□□□□ -0.05
CHMP3-203ENST00000409225 C1orf159Q96HA4 380 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 C3orf14Q9HBI5 128 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 ZNF225Q9UK10 706 aa14.74□□□□□ -0.05
CHMP3-203ENST00000409225 CCDC188H7C350 402 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 H7C417 338 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 OXSR1O95747 527 aaPredicted RBP14.73□□□□□ -0.05
CHMP3-203ENST00000409225 RBP1P09455 135 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 CSF3P09919 207 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 HSD3B1P14060 373 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 HSD3B2P26439 372 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 CFPP27918 469 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 MANFP55145 182 aaKnown RBP14.73□□□□□ -0.05
CHMP3-203ENST00000409225 ACSM2AQ08AH3 577 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 ACSM2BQ68CK6 577 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 OR4C3Q8NH37 302 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 ACTRT2Q8TDY3 377 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 C3orf49Q96BT1 292 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 APIPQ96GX9 242 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 RADILQ96JH8 1075 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 ACPTQ9BZG2 426 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 C12orf65Q9H3J6 166 aaKnown RBP14.73□□□□□ -0.05
CHMP3-203ENST00000409225 L2HGDHQ9H9P8 463 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 GP6Q9HCN6 339 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 EQTNQ9NQ60 294 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 NFU1Q9UMS0 254 aa14.73□□□□□ -0.05
CHMP3-203ENST00000409225 PLCE1Q9P212 2302 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 IGHV3-15A0A0B4J1V0 119 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 C9JVG2 144 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 TCF21O43680 179 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 SLITRK5O94991 958 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 KRT6AP02538 564 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 KRT6BP04259 564 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 GGT1P19440 569 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 DDCP20711 480 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 EDNRAP25101 427 aa14.72□□□□□ -0.05
CHMP3-203ENST00000409225 TIA1P31483 386 aaKnown RBP eCLIP14.72□□□□□ -0.05
CHMP3-203ENST00000409225 MAGEA4P43358 317 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms