RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 POLDIP3Q9BY77 421 aaKnown RBP17.53■□□□□ 0.4
USP39-202ENST00000409025 EGLN3Q9H6Z9 239 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 CNOT2Q9NZN8 540 aaKnown RBP17.53■□□□□ 0.4
USP39-202ENST00000409025 FBXO4Q9UKT5 387 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 CFL2Q9Y281 166 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 TCRBV16S1A1N1A0A5B0 115 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 NPIPB9F8W1W9 429 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 PIP5K1CO60331 668 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 MAN1A2O60476 641 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 ENTPD6O75354 484 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 CER1O95813 267 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 PSMB9P28065 219 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 C21orf33P30042 268 aaPredicted RBP17.52■□□□□ 0.4
USP39-202ENST00000409025 RORAP35398 523 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 ST13P50502 369 aaKnown RBP17.52■□□□□ 0.4
USP39-202ENST00000409025 SLC37A1P57057 533 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 PLAURQ03405 335 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 ST3GAL4Q11206 333 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 FGFBP1Q14512 234 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.52■□□□□ 0.4
USP39-202ENST00000409025 ZNF613Q6PF04 617 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 RNF113BQ8IZP6 322 aaKnown RBP17.52■□□□□ 0.4
USP39-202ENST00000409025 RNF217Q8TC41 542 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 OR8D2Q9GZM6 311 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 DSN1Q9H410 356 aa17.52■□□□□ 0.4
USP39-202ENST00000409025 PATE3B3GLJ2 98 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 STSP08842 583 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 CCNA2P20248 432 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 GPR4P46093 362 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 PCYT1AP49585 367 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 NSDHLQ15738 373 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 TBCEQ15813 527 aaPredicted RBP17.51■□□□□ 0.39
USP39-202ENST00000409025 UBE2UQ5VVX9 321 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 RHBDD2Q6NTF9 364 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 ACSM5Q6NUN0 579 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 SLC27A4Q6P1M0 643 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 CMIPQ8IY22 773 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 DTWD2Q8NBA8 298 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 OR2I1PQ8NGU4 316 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 SLC35B4Q969S0 331 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 PLA2G12AQ9BZM1 189 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 DNAJB12Q9NXW2 375 aaKnown RBP17.51■□□□□ 0.39
USP39-202ENST00000409025 SELENONQ9NZV5 590 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 IGHV5-10-1A0A0J9YXX1 117 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 POLR1CO15160 346 aaPredicted RBP17.51■□□□□ 0.39
USP39-202ENST00000409025 KLF4O43474 513 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 LYPD3O95274 346 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 ACVR2AP27037 513 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 PPICP45877 212 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 OCLNQ16625 522 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 TRIM61Q5EBN2 209 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 ZNF550Q7Z398 422 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 ANKRD13BQ86YJ7 626 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 PRSS58Q8IYP2 241 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 ZNF321PQ8N8H1 164 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 TMEM105Q8N8V8 129 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 SLC2A12Q8TD20 617 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 TMEM239Q8WW34 195 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 OSTF1Q92882 214 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 ART5Q96L15 291 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 OR6C1Q96RD1 312 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 PRRG3Q9BZD7 231 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 TRIM2Q9C040 744 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 DNAJC27Q9NZQ0 273 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 ENPP5Q9UJA9 477 aa17.51■□□□□ 0.39
USP39-202ENST00000409025 TECTAO75443 2155 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 TMEM221A6NGB7 291 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 TRIM64BA6NI03 449 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 M0R296 226 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 TLX2O43763 284 aaPredicted RBP17.5■□□□□ 0.39
USP39-202ENST00000409025 PIPP12273 146 aaPredicted RBP17.5■□□□□ 0.39
USP39-202ENST00000409025 DAB2P98082 770 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 ROR2Q01974 943 aaKnown RBP17.5■□□□□ 0.39
USP39-202ENST00000409025 SNAPC1Q16533 368 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 MEDAGQ5VYS4 303 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 FAM26EQ8N5C1 309 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 OR14A16Q8NHC5 309 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 ZNF721Q8TF20 911 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 DAZLQ92904 295 aaKnown RBP17.5■□□□□ 0.39
USP39-202ENST00000409025 CCDC74BQ96LY2 380 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 DCUN1D5Q9BTE7 237 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 GPN2Q9H9Y4 310 aaPredicted RBP17.5■□□□□ 0.39
USP39-202ENST00000409025 MKL2Q9ULH7 1088 aa17.5■□□□□ 0.39
USP39-202ENST00000409025 RPL36Q9Y3U8 105 aaKnown RBP17.5■□□□□ 0.39
USP39-202ENST00000409025 ARHGAP33O14559 1287 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 PRKYO43930 277 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 DDAH2O95865 285 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 IGKV3-11P04433 115 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 LCKP06239 509 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 SLC15A1P46059 708 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 SLC25A30Q5SVS4 291 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 WDR88Q6ZMY6 472 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 POGLUT1Q8NBL1 392 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 OR8D4Q8NGM9 314 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 C9orf43Q8TAL5 461 aaPredicted RBP17.49■□□□□ 0.39
USP39-202ENST00000409025 IFI44Q8TCB0 444 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 SLC38A2Q96QD8 506 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 TEX12Q9BXU0 123 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 VN1R1Q9GZP7 353 aa17.49■□□□□ 0.39
USP39-202ENST00000409025 TBC1D23Q9NUY8 699 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms