RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PLEKHA6Q9Y2H5 1048 aa17.35■□□□□ 0.37
SMARCB1-204ENST00000407422 NPIPA5A0A0B4J1W7 369 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 NPIPA7E9PJI5 369 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 MSTNO14793 375 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 BIRC5O15392 142 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 AQP8O94778 261 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 OPN1LWP04000 364 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 DHRS4L1P0CG22 281 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 NPIPA8P0DM63 369 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 LCN1P31025 176 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 EEF1A1P68104 462 aaKnown RBP17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 HBA1P69905 142 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 FAM27E3Q08E93 113 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 PGS1Q32NB8 556 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 LSM12Q3MHD2 195 aaKnown RBP17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 CEP85LQ5SZL2 805 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 EEF1A1P5Q5VTE0 462 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 FBXW10Q5XX13 1052 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 OR56A1Q8NGH5 318 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 SORT1Q99523 831 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 BHLHE41Q9C0J9 482 aaPredicted RBP17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 OPN3Q9H1Y3 402 aaPredicted RBP17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 AKTIPQ9H8T0 292 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 MED17Q9NVC6 651 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 ZNF175Q9Y473 711 aa17.34■□□□□ 0.37
SMARCB1-204ENST00000407422 C2CD3Q4AC94 2353 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 A0A087WZY1 265 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 SH3D21A4FU49 640 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 EIF1AYO14602 144 aaKnown RBP17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 CFLARO15519 480 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 ZNF17P17021 662 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 PSMA4P25789 261 aaKnown RBP17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 CLDN8P56748 225 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 PLPPR5Q32ZL2 321 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 TNFAIP8L3Q5GJ75 292 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 ZNF474Q6S9Z5 364 aaPredicted RBP17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 GTPBP8Q8N3Z3 284 aaPredicted RBP17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 NATD1Q8N6N6 113 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 ACTRT2Q8TDY3 377 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 ADAMTS15Q8TE58 950 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 NINJ1Q92982 152 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 PGM2Q96G03 612 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 DACH2Q96NX9 599 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 ZIM3Q96PE6 472 aa17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 NOP53Q9NZM5 478 aaKnown RBP17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 FAF1Q9UNN5 650 aaPredicted RBP17.33■□□□□ 0.37
SMARCB1-204ENST00000407422 HEATR5AQ86XA9 2040 aa17.33■□□□□ 0.36
SMARCB1-204ENST00000407422 ACANP16112 2415 aa17.33■□□□□ 0.36
SMARCB1-204ENST00000407422 A0A1W2PQD3 144 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 TM9SF1O15321 606 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 OIP5O43482 229 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 CD1EP15812 388 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 BGNP21810 368 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 EIF1AXP47813 144 aaKnown RBP17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 SLC6A8P48029 635 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 SLC1A6P48664 564 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 ZNF41P51814 821 aaPredicted RBP17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 C21orf58P58505 322 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 RPS3AP61247 264 aaKnown RBP17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 RPS26P62854 115 aaKnown RBP17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 MAD2L1Q13257 205 aaPredicted RBP17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 POU4F3Q15319 338 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 SGCBQ16585 318 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 CLECL1Q8IZS7 167 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 CLEC4FQ8N1N0 589 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 OR5D16Q8NGK9 328 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 B4GALNT2Q8NHY0 566 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 POC1BQ8TC44 478 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 SFXN5Q8TD22 340 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 RNF145Q96MT1 663 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 TMEM185BQ9H7F4 350 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 NEUROD4Q9HD90 331 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 ASIC5Q9NY37 505 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 RAP2CQ9Y3L5 183 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 CGAP01215 116 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 ATP6V1C1P21283 382 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 SOAT1P35610 550 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 ZNF117Q03924 483 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 CTU2Q2VPK5 515 aaKnown RBP17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 DCST2Q5T1A1 773 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.32■□□□□ 0.366e-15■□□□□ 9.2
SMARCB1-204ENST00000407422 OR4F3Q6IEY1 312 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 PPP4R4Q6NUP7 873 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 CBLN3Q6UW01 205 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 CAMKMTQ7Z624 323 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 MISPQ8IVT2 679 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 OR10D3Q8NH80 312 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 PHOSPHO1Q8TCT1 267 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 ZBTB8AQ96BR9 441 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 ADGRG7Q96K78 797 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 KCNK9Q9NPC2 374 aa17.32■□□□□ 0.36
SMARCB1-204ENST00000407422 A0A1W2PPR1 153 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 C7orf72A4D263 438 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 HRGP04196 525 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 MYZAPP0CAP1 466 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 IL11P20809 199 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 RPL14P50914 215 aaKnown RBP17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 OCRLQ01968 901 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 GUSBP1Q15486 140 aa17.31■□□□□ 0.36
SMARCB1-204ENST00000407422 SMU1Q2TAY7 513 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms