RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 BOKQ9UMX3 212 aaPredicted RBP11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 C15orf41Q9Y2V0 281 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 GPC6Q9Y625 555 aaPredicted RBP11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FREM3P0C091 2139 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HEATR5AQ86XA9 2040 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 A0A0G2JPF8 293 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PRORSD1PA6NEY8 169 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SERINC4A6NH21 518 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 B2RBV5 119 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HNRNPCL2B2RXH8 293 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HNRNPCL3B7ZW38 293 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 B8ZZF3 427 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SCDO00767 359 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 NDUFB5O43674 189 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HNRNPCL1O60812 293 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ADAM11O75078 769 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 WISP1O95388 367 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 EPPINO95925 133 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HNRNPCL4P0DMR1 293 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF24P17028 368 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CALB2P22676 271 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 AQP1P29972 269 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PGM1P36871 562 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MAGEA5P43359 124 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF117Q03924 483 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 LIPEQ05469 1076 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 LSRQ86X29 649 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 VRK2Q86Y07 508 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PLCZ1Q86YW0 608 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CHERPQ8IWX8 916 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 METTL25Q8N6Q8 603 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF614Q8N883 585 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FAM98AQ8NCA5 519 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HIPK4Q8NE63 616 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 BBS10Q8TAM1 723 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 DUSP19Q8WTR2 217 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FAR1Q8WVX9 515 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 NR4A3Q92570 626 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SLC7A6OSQ96CW6 309 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 JSRP1Q96MG2 331 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 NPAS1Q99742 590 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ECSITQ9BQ95 431 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SPATA9Q9BWV2 254 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MTHFD2LQ9H903 347 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TAS2R1Q9NYW7 299 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CALML5Q9NZT1 146 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MED11Q9P086 117 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PPP4R1LQ9P1A2 415 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 LIPGQ9Y5X9 500 aa11.3□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TTLL8A6PVC2 850 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TMEM229AB2RXF0 380 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TPST1O60507 370 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 NID1P14543 1247 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ADH7P40394 386 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MASP1P48740 699 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 EEFSECP57772 596 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PPIAP62937 165 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 EEF1A1P68104 462 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FOXK1P85037 733 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PLGLB1Q02325 96 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 C17orf67Q0P5P2 114 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 BNIP1Q12981 228 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SKP2Q13309 424 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 GLIPR1L2Q4G1C9 344 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FAM180AQ6UWF9 173 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF836Q6ZNA1 936 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FGD2Q7Z6J4 655 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 IFNEQ86WN2 208 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MICU2Q8IYU8 434 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 DEFB107AQ8IZN7 70 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CLIP4Q8N3C7 705 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FAM109AQ8N4B1 249 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF527Q8NB42 609 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 OR2T12Q8NG77 320 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 OR1J4Q8NGS1 313 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 OR52P1PQ8NH57 321 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CPT1CQ8TCG5 803 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PHOSPHO1Q8TCT1 267 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 OIT3Q8WWZ8 545 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CNOT9Q92600 299 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PMM1Q92871 262 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SH3YL1Q96HL8 342 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 DSN1Q9H410 356 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SPAG4Q9NPE6 437 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 DNAJB12Q9NXW2 375 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CD300AQ9UGN4 299 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ICAM5Q9UMF0 924 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF443Q9Y2A4 671 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CARD8Q9Y2G2 431 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF407Q9C0G0 2248 aa11.29□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MED12Q93074 2177 aa11.28□□□□□ -0.6
HLA-DQB1-203ENST00000399082 C5orf58C9J3I9 102 aa11.28□□□□□ -0.6
HLA-DQB1-203ENST00000399082 NPIPA5E9PKD4 350 aa11.28□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNHIT1O43257 154 aa11.28□□□□□ -0.6
HLA-DQB1-203ENST00000399082 GMFGO60234 142 aa11.28□□□□□ -0.6
HLA-DQB1-203ENST00000399082 DNAJA2O60884 412 aa11.28□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MFN2O95140 757 aa11.28□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CRYABP02511 175 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms