RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TEX261Q6UWH6 196 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 TMEM163Q8TC26 289 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 FANK1Q8TC84 345 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 ECHDC3Q96DC8 303 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 PELOQ9BRX2 385 aaKnown RBP13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 DPH7Q9BTV6 452 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 GABARAPL1Q9H0R8 117 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 U3KQ87 197 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 KIF13BQ9NQT8 1826 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNFX1Q9P2E3 1918 aaKnown RBP13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 TGM6O95932 706 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF250P15622 560 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 DNASE1L1P49184 302 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 FGL1Q08830 312 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 KHDRBS2Q5VWX1 349 aaKnown RBP13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 C18orf63Q68DL7 685 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 PODNL1Q6PEZ8 512 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 SIAH3Q8IW03 269 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 NRMQ8IXM6 262 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 OR4M1Q8NGD0 313 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ADAMTS14Q8WXS8 1223 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 RAB11FIP5Q9BXF6 653 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 PRAMEF2O60811 474 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 SDC3O75056 442 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 KAT7O95251 611 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ASGR2P07307 311 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ACP2P11117 423 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 PRKXP51817 358 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 C14orf105Q9NVL8 296 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF226Q9NYT6 803 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 MED31Q9Y3C7 131 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 NAALAD2Q9Y3Q0 740 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 DUXAA6NLW8 204 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 PSMD9O00233 223 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ZDHHC11BP0C7U3 371 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ACADLP28330 430 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 SHC1P29353 583 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 PER3P56645 1201 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 BTG1P62324 171 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 P2RY14Q15391 338 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ACSM3Q53FZ2 586 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 CD276Q5ZPR3 534 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 METTL2BQ6P1Q9 378 aaKnown RBP13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 KIAA1958Q8N8K9 716 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF740Q8NDX6 193 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 OR5W2Q8NH69 310 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 METTL2AQ96IZ6 378 aaKnown RBP13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ADAD1Q96M93 576 aaKnown RBP13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 TMEM43Q9BTV4 400 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 TMEM168Q9H0V1 697 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 SYNPO2LQ9H987 977 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 A0A0A6YYJ9 748 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 RNASET2O00584 256 aaKnown RBP13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ABLIM3O94929 683 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 TACSTD2P09758 323 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 HOXB2P14652 356 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 CEBPBP17676 345 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 FXYD6P3P58550 94 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 EIPR1Q53HC9 387 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 LRIF1Q5T3J3 769 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF776Q68DI1 518 aaPredicted RBP13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 GSG1LQ6UXU4 331 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 PRSS42Q7Z5A4 293 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 CD300LFQ8TDQ1 290 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 SAMD8Q96LT4 415 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 TRIM2Q9C040 744 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 P2RY12Q9H244 342 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 SPNS1Q9H2V7 528 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 SIRT5Q9NXA8 310 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 PPT2Q9UMR5 302 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 WDR45Q9Y484 360 aa13.72□□□□□ -0.21
RPRD1A-202ENST00000399022 LGALS8O00214 317 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 IGFBP1P08833 259 aaPredicted RBP13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 MAP3K8P41279 467 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 VEGFCP49767 419 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 HYAL2Q12891 473 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 BEX5Q5H9J7 111 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 COX20Q5RI15 118 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 QSOX2Q6ZRP7 698 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 C12orf45Q8N5I9 185 aaPredicted RBP13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 CYB561A3Q8NBI2 242 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 OR52I1Q8NGK6 324 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 OR10K1Q8NGX5 313 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 CPEB1Q9BZB8 566 aaKnown RBP13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 CST11Q9H112 138 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 TRAPPC4Q9Y296 219 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 A0A1W2PQU0 124 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 H3BQ06 376 aaPredicted RBP13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 SNRPBP14678 240 aaKnown RBP13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 HTR4Q13639 388 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF227Q86WZ6 799 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 NANOGP1Q8N7R0 232 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 OR51L1Q8NGJ5 315 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 ISG20Q96AZ6 181 aaKnown RBP13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 QRSL1Q9H0R6 528 aaKnown RBP13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 EGLN3Q9H6Z9 239 aa13.71□□□□□ -0.21
RPRD1A-202ENST00000399022 METTL8Q9H825 291 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms