RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 TMEM229AB2RXF0 380 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ANGPTL1O95841 491 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SERPINA1P01009 418 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 IFNA14P01570 189 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SP1P08047 785 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 KCNJ10P78508 379 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 PLAURQ03405 335 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CYBRD1Q53TN4 286 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ZNF766Q5HY98 468 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CBLL1Q75N03 491 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 DHFR2Q86XF0 187 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 MISPQ8IVT2 679 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CMIPQ8IY22 773 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 RBMXL3Q8N7X1 1067 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SMYD1Q8NB12 490 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 BHLHE22Q8NFJ8 381 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 RASSF5Q8WWW0 418 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 NSMCE2Q96MF7 247 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 RNF145Q96MT1 663 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 PINK1Q9BXM7 581 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 DEPPQ9NTK1 212 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ZNF232Q9UNY5 417 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SLC35A3Q9Y2D2 325 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 PCDHGB6Q9Y5F9 930 aa17.8■□□□□ 0.44
MAP1LC3A-203ENST00000397709 H3BNH8 94 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 NDUFB5O43674 189 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 TPST1O60507 370 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 DPM1O60762 260 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 EPPINO95925 133 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 NQO1P15559 274 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ENDOUP21128 410 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CNR1P21554 472 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 KCNJ5P48544 419 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 DUSP7Q16829 419 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ZSWIM7Q19AV6 140 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 MTX3Q5HYI7 312 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 MRPL2Q5T653 305 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 Q6ZS92 163 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ASB18Q6ZVZ8 466 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 EIF3MQ7L2H7 374 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 EID3Q8N140 333 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 GATSQ8NAP1 163 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 FAM71CQ8NEG0 241 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 GPR32P1Q8NGA4 272 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 PHOSPHO1Q8TCT1 267 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SLC26A7Q8TE54 656 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 TMEM41AQ96HV5 264 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 DOHHQ9BU89 302 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 KLHL1Q9NR64 748 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 DCAF13Q9NV06 445 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 OLAHQ9NV23 265 aa17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 KLF13Q9Y2Y9 288 aaPredicted RBP17.79■□□□□ 0.44
MAP1LC3A-203ENST00000397709 IGLV3-32A0A0A0MS00 114 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CDHR4A6H8M9 788 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 C17orf51A8MQB3 221 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 G3V3Y1 287 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SYT5O00445 386 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 BCAS1O75363 584 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 TRIM3O75382 744 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SNX4O95219 450 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 UBL4AP11441 157 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 DNASE1L1P49184 302 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 GLIPR1L2Q4G1C9 344 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 EIPR1Q53HC9 387 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CYP2R1Q6VVX0 501 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 GALNTL5Q7Z4T8 443 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 COMTD1Q86VU5 262 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SPPL2CQ8IUH8 684 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SULF2Q8IWU5 870 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CLIP4Q8N3C7 705 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 EXD3Q8N9H8 876 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 TMEM178AQ8NBL3 297 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 RAB3IPQ96QF0 476 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SDHAF3Q9NRP4 125 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 RPS6KA6Q9UK32 745 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 HRH3Q9Y5N1 445 aa17.78■□□□□ 0.44
MAP1LC3A-203ENST00000397709 BSNQ9UPA5 3926 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ITPR1Q14643 2758 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ATMQ13315 3056 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 TCRBV5S2A0A599 114 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 C2orf72A6NCS6 295 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CFAP73A6NFT4 308 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 B4DXG7 233 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ERVH48-1M5A8F1 160 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SNPHO15079 494 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SUV39H1O43463 412 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 OIP5O43482 229 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CIB2O75838 187 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 STAMBPO95630 424 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 CSTAP01040 98 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 FESP07332 822 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 C8BP07358 591 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 GPR85P60893 370 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SELENOWP63302 87 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 C17orf67Q0P5P2 114 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 SKP2Q13309 424 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 FLOT2Q14254 428 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 ZNF169Q14929 603 aaPredicted RBP17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 GRAMD2AQ8IUY3 354 aa17.77■□□□□ 0.44
MAP1LC3A-203ENST00000397709 OR2M7Q8NG81 312 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms