RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 EGLN3Q9H6Z9 239 aa13.84□□□□□ -0.19
MKS1-202ENST00000393119 FTSJ1Q9UET6 329 aa13.84□□□□□ -0.19
MKS1-202ENST00000393119 SLC7A7Q9UM01 511 aa13.84□□□□□ -0.19
MKS1-202ENST00000393119 A0A1B0GX78 115 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 A0A1W2PRQ8 180 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 H3BN98 237 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 GMFGO60234 142 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 ADRA2AP08913 450 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 GGT2P36268 569 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 EIF2B2P49770 351 aaKnown RBP13.83□□□□□ -0.19
MKS1-202ENST00000393119 SKP1P63208 163 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 DGCR6Q14129 220 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 PLEKHM3Q6ZWE6 761 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 KIF18BQ86Y91 864 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 FKBP10Q96AY3 582 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 UCK2Q9BZX2 261 aa13.83□□□□□ -0.19
MKS1-202ENST00000393119 IGKV3D-11A0A0A0MRZ8 115 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 KPNA4O00629 521 aaPredicted RBP13.83□□□□□ -0.2
MKS1-202ENST00000393119 DSCR3O14972 297 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 NR4A1P22736 598 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 GPR4P46093 362 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 CRISP1P54107 249 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 DSG2Q14126 1118 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 LARS2Q15031 903 aaKnown RBP13.83□□□□□ -0.2
MKS1-202ENST00000393119 PROX2Q3B8N5 592 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 FAM199XQ6PEV8 388 aaPredicted RBP13.83□□□□□ -0.2
MKS1-202ENST00000393119 BCORP1Q8N888 145 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 GRHL3Q8TE85 626 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 RAB2BQ8WUD1 216 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 GAL3ST4Q96RP7 486 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 LMF2Q9BU23 707 aaKnown RBP13.83□□□□□ -0.2
MKS1-202ENST00000393119 NUDT9Q9BW91 350 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 DGCR6LQ9BY27 220 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 SAP130Q9H0E3 1048 aa13.83□□□□□ -0.2
MKS1-202ENST00000393119 NXF5Q9H1B4 397 aaKnown RBP13.83□□□□□ -0.2
MKS1-202ENST00000393119 TEX51A0A1B0GUA7 166 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 CDHR4A6H8M9 788 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 SYT5O00445 386 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 FAAHO00519 579 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 GNB5O14775 395 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 OXSR1O95747 527 aaPredicted RBP13.82□□□□□ -0.2
MKS1-202ENST00000393119 AGR2O95994 175 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 CCL4P13236 92 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 ZNF28P17035 718 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 RPS4Y1P22090 263 aaKnown RBP13.82□□□□□ -0.2
MKS1-202ENST00000393119 SLC37A1P57057 533 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 SLC23A3Q6PIS1 610 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 ZBTB44Q8NCP5 570 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 SLC2A12Q8TD20 617 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 ZNF524Q96C55 264 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 SLC41A3Q96GZ6 507 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 APOL4Q9BPW4 351 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 POLR2J3Q9H1A7 115 aaKnown RBP13.82□□□□□ -0.2
MKS1-202ENST00000393119 OR10H1Q9Y4A9 318 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 ADAMTS20P59510 1910 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 AP3D1O14617 1153 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 SCRG1O75711 98 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 DDAH2O95865 285 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 BCL10O95999 233 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 NID1P14543 1247 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 C21orf33P30042 268 aaPredicted RBP13.82□□□□□ -0.2
MKS1-202ENST00000393119 AVPR2P30518 371 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 MPLP40238 635 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 OCA2Q04671 838 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 RBM48Q5RL73 367 aaKnown RBP13.82□□□□□ -0.2
MKS1-202ENST00000393119 AHSA2Q719I0 299 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 NRMQ8IXM6 262 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 CADM3Q8N126 398 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 MINDY2Q8NBR6 621 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 ZNF540Q8NDQ6 660 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 OR4D9Q8NGE8 314 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 PFN4Q8NHR9 129 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 HOXB13Q92826 284 aaPredicted RBP13.82□□□□□ -0.2
MKS1-202ENST00000393119 RTN4RQ9BZR6 473 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 AKIP1Q9NQ31 210 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 FBXO4Q9UKT5 387 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 SATB2Q9UPW6 733 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 IFT52Q9Y366 437 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 CLCA3PQ9Y6N3 262 aa13.82□□□□□ -0.2
MKS1-202ENST00000393119 PMS2P1A4D2B8 440 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 PRAMEF2O60811 474 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 FAM20BO75063 409 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 INMTO95050 263 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 ITGADQ13349 1161 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 CLEC12AQ5QGZ9 265 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 AGAP7PQ5VUJ5 663 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 ACSM5Q6NUN0 579 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 ZNF730Q6ZMV8 503 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 BTLAQ7Z6A9 289 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 STT3BQ8TCJ2 826 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 ZNF721Q8TF20 911 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 RELTQ969Z4 430 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 SH3YL1Q96HL8 342 aaPredicted RBP13.81□□□□□ -0.2
MKS1-202ENST00000393119 PRSS27Q9BQR3 290 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 LHPPQ9H008 270 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 KLHL28Q9NXS3 571 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 TAS2R16Q9NYV7 291 aa13.81□□□□□ -0.2
MKS1-202ENST00000393119 CBLCQ9ULV8 474 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms