RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SDF2Q99470 211 aa10.71□□□□□ -0.69
RFC4-202ENST00000392481 PIGQQ9BRB3 760 aa10.71□□□□□ -0.69
RFC4-202ENST00000392481 ENKD1Q9H0I2 346 aa10.71□□□□□ -0.69
RFC4-202ENST00000392481 SLCO1B3Q9NPD5 702 aa10.71□□□□□ -0.69
RFC4-202ENST00000392481 SDR39U1Q9NRG7 319 aaPredicted RBP10.71□□□□□ -0.69
RFC4-202ENST00000392481 INTS9Q9NV88 658 aaKnown RBP10.71□□□□□ -0.69
RFC4-202ENST00000392481 ZIM2Q9NZV7 527 aa10.71□□□□□ -0.69
RFC4-202ENST00000392481 KIAA1549Q9HCM3 1950 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 CCDC154A6NI56 674 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 C9JVG2 144 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 H3BNH8 94 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 DVL2O14641 736 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 SASH3O75995 380 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 IL6P05231 212 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 IGFBP2P18065 325 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 POU3F2P20265 443 aaPredicted RBP10.7□□□□□ -0.7
RFC4-202ENST00000392481 ATP12AP54707 1039 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 TMEM44Q2T9K0 475 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 SAXO2Q658L1 398 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 HEPHL1Q6MZM0 1159 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 ARSKQ6UWY0 536 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 TRIML2Q8N7C3 387 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 GATSQ8NAP1 163 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 NAXEQ8NCW5 288 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 WNT2BQ93097 391 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 PANX1Q96RD7 426 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 TM9SF2Q99805 663 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 TREX2Q9BQ50 279 aaPredicted RBP10.7□□□□□ -0.7
RFC4-202ENST00000392481 NMUR2Q9GZQ4 415 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
RFC4-202ENST00000392481 EXD2Q9NVH0 621 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 ZNF629Q9UEG4 869 aaPredicted RBP10.7□□□□□ -0.7
RFC4-202ENST00000392481 ZNF337Q9Y3M9 751 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 MED12LQ86YW9 2145 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 SPG11Q96JI7 2443 aa10.7□□□□□ -0.7
RFC4-202ENST00000392481 C7orf72A4D263 438 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 CLCA1A8K7I4 914 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 HCRTR2O43614 444 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 GMFGO60234 142 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 STX11O75558 287 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 GUSBP08236 651 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 SNRPB2P08579 225 aaKnown RBP10.69□□□□□ -0.7
RFC4-202ENST00000392481 PRF1P14222 555 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 ZNF17P17021 662 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 CHI3L1P36222 383 aaPredicted RBP10.69□□□□□ -0.7
RFC4-202ENST00000392481 KHKP50053 298 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 EEFSECP57772 596 aaKnown RBP10.69□□□□□ -0.7
RFC4-202ENST00000392481 TXNL4AP83876 142 aaKnown RBP10.69□□□□□ -0.7
RFC4-202ENST00000392481 CD226Q15762 336 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 ARHGAP11BQ3KRB8 267 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 ATAD3BQ5T9A4 648 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 AP1ARQ63HQ0 302 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 MEX3BQ6ZN04 569 aaKnown RBP10.69□□□□□ -0.7
RFC4-202ENST00000392481 C16orf62Q7Z3J2 963 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 MCEMP1Q8IX19 187 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 MIER2Q8N344 545 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 GTPBP8Q8N3Z3 284 aaPredicted RBP10.69□□□□□ -0.7
RFC4-202ENST00000392481 MEIOBQ8N635 442 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 B4GALNT2Q8NHY0 566 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 PHOSPHO1Q8TCT1 267 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 CKAP2Q8WWK9 683 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 XAGE5Q8WWM1 108 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 ZBTB8AQ96BR9 441 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 SH3YL1Q96HL8 342 aaPredicted RBP10.69□□□□□ -0.7
RFC4-202ENST00000392481 MARK4Q96L34 752 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 ZFP3Q96NJ6 502 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 SLC35A5Q9BS91 424 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 OR51I1Q9H343 314 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 TCF7L2Q9NQB0 619 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 CLCF1Q9UBD9 225 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 STOML1Q9UBI4 398 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 DTNAQ9Y4J8 743 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 AP4B1Q9Y6B7 739 aa10.69□□□□□ -0.7
RFC4-202ENST00000392481 CCDC168Q8NDH2 2452 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 NPIPA5A0A0B4J1W7 369 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 NPIPA7E9PJI5 369 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 POLR3GO15318 223 aaPredicted RBP10.68□□□□□ -0.7
RFC4-202ENST00000392481 IL18BPO95998 194 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 NPIPA8P0DM63 369 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 OR12D1P0DN82 309 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 BMP5P22003 454 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 CTSSP25774 331 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 OPRM1P35372 400 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 MRPL19P49406 292 aaKnown RBP10.68□□□□□ -0.7
RFC4-202ENST00000392481 IDH3AP50213 366 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 ZNF41P51814 821 aaPredicted RBP10.68□□□□□ -0.7
RFC4-202ENST00000392481 POLR2JP52435 117 aaKnown RBP10.68□□□□□ -0.7
RFC4-202ENST00000392481 ZNF136P52737 540 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 CASP9P55211 416 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 SUMO3P55854 103 aaPredicted RBP10.68□□□□□ -0.7
RFC4-202ENST00000392481 ZNF117Q03924 483 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 PLPPR5Q32ZL2 321 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.68□□□□□ -0.7
RFC4-202ENST00000392481 TNFAIP8L2Q6P589 184 aaPredicted RBP10.68□□□□□ -0.7
RFC4-202ENST00000392481 POMZP3Q6PJE2 187 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 ZNF621Q6ZSS3 439 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 MSANTD1Q6ZTZ1 278 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 CHMP1BQ7LBR1 199 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 GDF7Q7Z4P5 450 aa10.68□□□□□ -0.7
RFC4-202ENST00000392481 C9orf106Q8NAJ2 232 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms