RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 EXOSC3Q9NQT5 275 aaKnown RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 RYDENQ9NUL5 291 aaKnown RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 PAK1IP1Q9NWT1 392 aaPredicted RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 SIDT1Q9NXL6 827 aaKnown RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 COPS7AQ9UBW8 275 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 ATXN7L1Q9ULK2 861 aaPredicted RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 RPL36Q9Y3U8 105 aaKnown RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 SPTBP11277 2137 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 SERINC4A6NH21 518 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 HRKO00198 91 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 DDAH2O95865 285 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 IGF2P01344 180 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 NGFRP08138 427 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 SP9P0CG40 484 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 MYF5P13349 255 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 POU1F1P28069 291 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 GRK6P43250 576 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ST13P50502 369 aaKnown RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 CTBP2P56545 445 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 PRKCDQ05655 676 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 NCF4Q15080 339 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 TBCEQ15813 527 aaPredicted RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 KLHL26Q53HC5 615 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 PDZK1Q5T2W1 519 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 MFSD4BQ5TF39 518 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 UBE2UQ5VVX9 321 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 LAIR1Q6GTX8 287 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ULK3Q6PHR2 472 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 Q6ZPB1 254 aaPredicted RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 TMPRSS11FQ6ZWK6 438 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 OVCH1Q7RTY7 1134 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 NKAIN4Q8IVV8 208 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 CCDC103Q8IW40 242 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 SLC2A12Q8TD20 617 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ZFAND2BQ8WV99 257 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 FAR1Q8WVX9 515 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 DNAJA4Q8WW22 397 aaPredicted RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 GGHQ92820 318 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 UBE2FQ969M7 185 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ADIPOR1Q96A54 375 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ISOC1Q96CN7 298 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 SLC38A2Q96QD8 506 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 PRSS27Q9BQR3 290 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ITPAQ9BY32 194 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 VN1R1Q9GZP7 353 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 RACGAP1Q9H0H5 632 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 DNAJB12Q9NXW2 375 aaKnown RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 ERVK-18Q9QC07 812 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 SLC7A7Q9UM01 511 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 PPIEQ9UNP9 301 aaKnown RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 RP1P56715 2156 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 A0A0B4J2E0 115 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 C2orf92A0A1B0GVN3 265 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 A0A1B0GX12 115 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 CLDN24A6NM45 220 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 FRS3O43559 492 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 SCRG1O75711 98 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 IGKV1D-16P01601 117 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 THY1P04216 161 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 HMGN1P05114 100 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ACP1P24666 158 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 CSTF2P33240 577 aaKnown RBP eCLIP12.53□□□□□ -0.46e-12■■■□□ 17.9
SEC13-203ENST00000383801 ACAA2P42765 397 aaKnown RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 SLC15A1P46059 708 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 PCYT1AP49585 367 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ZFP36L1Q07352 338 aaKnown RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 LSAMPQ13449 338 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 NKAIN1Q4KMZ8 207 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 VWA2Q5GFL6 755 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 HLA-DQA1Q5Y7H0 255 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 LINC00114Q6XXX2 140 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 SLC29A4Q7RTT9 530 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 TMPRSS9Q7Z410 1059 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 HMGN2P46Q86SG4 172 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ANKRD13BQ86YJ7 626 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 CYP4Z2PQ8N1L4 340 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 GALNT15Q8N3T1 639 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ZSCAN1Q8NBB4 408 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 OR4N2Q8NGD1 307 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 STT3BQ8TCJ2 826 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 DOK4Q8TEW6 326 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 TMEM239Q8WW34 195 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 NMD3Q96D46 503 aaKnown RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 CCDC74BQ96LY2 380 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 LRFN5Q96NI6 719 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 ZNF426Q9BUY5 554 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 LHPPQ9H008 270 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 GPN2Q9H9Y4 310 aaPredicted RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 ACOT13Q9NPJ3 140 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 SELENONQ9NZV5 590 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 NXT1Q9UKK6 140 aaKnown RBP12.53□□□□□ -0.4
SEC13-203ENST00000383801 MKL2Q9ULH7 1088 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 DTX4Q9Y2E6 619 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 MED31Q9Y3C7 131 aa12.53□□□□□ -0.4
SEC13-203ENST00000383801 A0A1W2PQD3 144 aa12.52□□□□□ -0.41
SEC13-203ENST00000383801 VSTM2BA6NLU5 285 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms