RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 SNPHO15079 494 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 STX11O75558 287 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 CD27P26842 260 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 SMSP52788 366 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 C19orf57Q0VDD7 668 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 ZAR1Q86SH2 424 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 OR52R1Q8NGF1 315 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 PIGXQ8TBF5 258 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 TEX47Q8TBZ9 253 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 ACOT11Q8WXI4 607 aaPredicted RBP13.8□□□□□ -0.2
PRNP-201ENST00000379440 FGF11Q92914 225 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 CTHRC1Q96CG8 243 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 ZNF582Q96NG8 517 aaPredicted RBP13.8□□□□□ -0.2
PRNP-201ENST00000379440 PHOX2BQ99453 314 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 AKIP1Q9NQ31 210 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 DUSP22Q9NRW4 184 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 IL20RAQ9UHF4 553 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 TGFBR3LH3BV60 316 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 POLR1CO15160 346 aaPredicted RBP13.79□□□□□ -0.2
PRNP-201ENST00000379440 OR10H2O60403 315 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 APOL3O95236 402 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 CBX7O95931 251 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 CSTF2P33240 577 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRNP-201ENST00000379440 NUDT1P36639 197 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 IFNGR2P38484 337 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 SERPINB10P48595 397 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 NCF4Q15080 339 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 ELOCQ15369 112 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 DECR1Q16698 335 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 MRPL2Q5T653 305 aaKnown RBP13.79□□□□□ -0.2
PRNP-201ENST00000379440 GLRX5Q86SX6 157 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 GJD3Q8N144 294 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 OR6Q1Q8NGQ2 317 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 NR4A3Q92570 626 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 PEX11GQ96HA9 241 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 HRKO00198 91 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 FOXS1O43638 330 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 SDC3O75056 442 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 CSO75390 466 aaKnown RBP13.79□□□□□ -0.2
PRNP-201ENST00000379440 CH25HO95992 272 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 NME1P15531 152 aaKnown RBP13.79□□□□□ -0.2
PRNP-201ENST00000379440 GNSP15586 552 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 SLC13A2Q13183 592 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 SSX1Q16384 188 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 PRTGQ2VWP7 1150 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 MEDAGQ5VYS4 303 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 SLC27A4Q6P1M0 643 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 SNX29P2Q8IUI4 249 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 METTL27Q8N6F8 245 aaPredicted RBP13.79□□□□□ -0.2
PRNP-201ENST00000379440 OPALINQ96PE5 141 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 SLC38A3Q99624 504 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 SPEGQ15772 3267 aa13.79□□□□□ -0.2
PRNP-201ENST00000379440 OR5F1O95221 314 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 PROS1P07225 676 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 SLC35E2P0CK97 266 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 BMP4P12644 408 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 HTR2AP28223 471 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 SOX3P41225 446 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 MAP3K8P41279 467 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 ZNF155Q12901 538 aaPredicted RBP13.78□□□□□ -0.2
PRNP-201ENST00000379440 ZNF846Q147U1 533 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 DEFB133Q30KQ1 61 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 RASSF6Q6ZTQ3 369 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 ATCAYQ86WG3 371 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 VWA5B2Q8N398 1253 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 STACQ99469 402 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 ANKRD19PQ9H560 264 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 UCKL1Q9NWZ5 548 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 LSM2Q9Y333 95 aaKnown RBP13.78□□□□□ -0.2
PRNP-201ENST00000379440 CDC42EP2O14613 210 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 DBIP07108 87 aaKnown RBP13.78□□□□□ -0.2
PRNP-201ENST00000379440 THBS1P07996 1170 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 RPS4Y1P22090 263 aaKnown RBP13.78□□□□□ -0.2
PRNP-201ENST00000379440 UGT2B10P36537 528 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 CAPZBP47756 277 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 FASLGP48023 281 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 LIMK1P53667 647 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 GFERP55789 205 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 SMAD2Q15796 467 aaKnown RBP13.78□□□□□ -0.2
PRNP-201ENST00000379440 MBOAT2Q6ZWT7 520 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 OR4N2Q8NGD1 307 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 MCFD2Q8NI22 146 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 HMG20AQ9NP66 347 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 POLHQ9Y253 713 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 ABCA7Q8IZY2 2146 aa13.78□□□□□ -0.2
PRNP-201ENST00000379440 H0YC42 278 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 DSCR3O14972 297 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 KIAA0513O60268 411 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 NID1P14543 1247 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 S1PR1P21453 382 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 EVI2BP34910 448 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 POU6F2P78424 691 aaPredicted RBP13.77□□□□□ -0.2
PRNP-201ENST00000379440 BTG2P78543 158 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 WDR88Q6ZMY6 472 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 GKN2Q86XP6 184 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 OR4Q3Q8NH05 313 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 PRSS27Q9BQR3 290 aa13.77□□□□□ -0.2
PRNP-201ENST00000379440 HHATLQ9HCP6 504 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms