RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 TBC1D25Q3MII6 688 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 SYT13Q7L8C5 426 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 CPOQ8IVL8 374 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 OR2T33Q8NG76 320 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 TMEM239Q8WW34 195 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 STACQ99469 402 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 TTYH1Q9H313 450 aaPredicted RBP17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 OR52D1Q9H346 318 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 GPR27Q9NS67 375 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 PEX16Q9Y5Y5 336 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 CDH10Q9Y6N8 788 aa17.83■□□□□ 0.45
PCDHA4-201ENST00000378125 SDK1Q7Z5N4 2213 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 UNC119BA6NIH7 251 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 SNTNA6NMZ2 147 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 BRINP1O60477 761 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 SDC3O75056 442 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 CDRT1O95170 752 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 IGKV1D-16P01601 117 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 SLC35E2P0CK97 266 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 LIMS3P0CW19 117 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 LIMS4P0CW20 117 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 EMDP50402 254 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 FXYD6P3P58550 94 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 PSG6Q00889 435 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 C3orf38Q5JPI3 329 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 EXOSC6Q5RKV6 272 aaKnown RBP17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 C1GALT1C1Q96EU7 318 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 CEP19Q96LK0 163 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 UBQLN3Q9H347 655 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 HINT3Q9NQE9 182 aaKnown RBP17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 WDR70Q9NW82 654 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 SATB2Q9UPW6 733 aa17.83■□□□□ 0.44
PCDHA4-201ENST00000378125 HYKKA2RU49 373 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 CCDC85CA6NKD9 419 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 GNB5O14775 395 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 MBTPS2O43462 519 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 HYAL3O43820 417 aaPredicted RBP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 ADAM11O75078 769 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 GLULP15104 373 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 MAOAP21397 527 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 PGDP52209 483 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 ZNF791Q3KP31 576 aaPredicted RBP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 AADACL4Q5VUY2 407 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 RNLSQ5VYX0 342 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 PLBD1Q6P4A8 553 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 LAPTM4BQ86VI4 370 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 POC5Q8NA72 575 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 PSD4Q8NDX1 1056 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 FANK1Q8TC84 345 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 RIT1Q92963 219 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 RBM18Q96H35 190 aaKnown RBP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 PRRG3Q9BZD7 231 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 FGF20Q9NP95 211 aaPredicted RBP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 PRDM9Q9NQV7 894 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 TXNL4BQ9NX01 149 aaKnown RBP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 ERVK13-1Q9NX77 482 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 SIDT1Q9NXL6 827 aaKnown RBP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 A3GALT2U3KPV4 340 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 TAF4O00268 1085 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 FOXS1O43638 330 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 LALBAP00709 142 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 ENDOUP21128 410 aaKnown RBP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 MAP3K8P41279 467 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 GFERP55789 205 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 ZNF267Q14586 743 aaPredicted RBP17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 DEFB133Q30KQ1 61 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 NKAIN2Q5VXU1 208 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 ARHGEF39Q8N4T4 335 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 OR13C2Q8NGS9 318 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 TGM7Q96PF1 710 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 SLC38A3Q99624 504 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 NEURL2Q9BR09 285 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 TEX12Q9BXU0 123 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 FOLH1BQ9HBA9 442 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 C14orf119Q9NWQ9 140 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 CBLCQ9ULV8 474 aa17.82■□□□□ 0.44
PCDHA4-201ENST00000378125 TRAV27A0A087WT01 109 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 RFPL3O75679 317 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 SAGP10523 405 aaPredicted RBP17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 CPEP16870 476 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 S1PR1P21453 382 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 CSTF1Q05048 431 aaKnown RBP17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 MADCAM1Q13477 382 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 UBXN2BQ14CS0 331 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 SPANXN2Q5MJ10 180 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 SYT14Q8NB59 555 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 OR51G2Q8NGK0 314 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 OR51A7Q8NH64 312 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 SPACA7Q96KW9 195 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 TBX5Q99593 518 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 SMURF1Q9HCE7 757 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 H2AFY2Q9P0M6 372 aaPredicted RBP17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 ZNF223Q9UK11 482 aaPredicted RBP17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 ZNF670-ZNF695F2Z2N8 137 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 LYPD3O95274 346 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 SLC1A3P43003 542 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 PRKCDQ05655 676 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 FAM53BQ14153 422 aa17.81■□□□□ 0.44
PCDHA4-201ENST00000378125 NDUFAF6Q330K2 333 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms