RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FGF14Q92915 247 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 C16orf58Q96GQ5 468 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 UBL7Q96S82 380 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-203ENST00000374877 C17orf62Q9BQA9 187 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF649Q9BS31 505 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 DPH7Q9BTV6 452 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 CACNG6Q9BXT2 260 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ZDHHC5Q9C0B5 715 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 HEXA-AS1Q9H8Q6 139 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 MED20Q9H944 212 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ACSS1Q9NUB1 689 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-203ENST00000374877 CBLCQ9ULV8 474 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 TSPAN11A1L157 253 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 OTOL1A6NHN0 477 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 PIP5K1CO60331 668 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 C8orf89P0DMQ9 161 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 IGFBP4P22692 258 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 DNASE1P24855 282 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 HTR1FP30939 366 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 NTSP30990 170 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 GJA4P35212 333 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 MMP12P39900 470 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 OMPP47874 163 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SLC16A1P53985 500 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 ST8SIA6P61647 398 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SLC3A1Q07837 685 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 ST3GAL3Q11203 375 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 COL28A1Q2UY09 1125 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 PGGHGQ32M88 737 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 MTFR2Q6P444 385 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SFXN4Q6P4A7 337 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 PLBD1Q6P4A8 553 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 MARVELD3Q96A59 401 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 C12orf66Q96MD2 445 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 CAMK1GQ96NX5 476 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 ALG8Q9BVK2 526 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 NKIRAS2Q9NYR9 191 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 NFKBIL1Q9UBC1 381 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 CHST2Q9Y4C5 530 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 IFNA7P01567 189 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 IGHA1P01876 353 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 GDI1P31150 447 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 TRHRP34981 398 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 FRKP42685 505 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 GCGRP47871 477 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 VSX2P58304 361 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 HSF2Q03933 536 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SMAD4Q13485 552 aaKnown RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 TMEM44Q2T9K0 475 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 CD276Q5ZPR3 534 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 PLEKHM3Q6ZWE6 761 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 ACBD7Q8N6N7 88 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 OR8K5Q8NH50 307 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 RGMAQ96B86 450 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SAMD8Q96LT4 415 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 PINK1Q9BXM7 581 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SLC35C2Q9NQQ7 365 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 BABAM2Q9NXR7 383 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 NUBP2Q9Y5Y2 271 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 PLXNA2O75051 1894 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 CASC3O15234 703 aaKnown RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 TBX19O60806 448 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 LILRB5O75023 590 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 ATF4P18848 351 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SOX9P48436 509 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 RAB14P61106 215 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 STXBP1P61764 594 aaKnown RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 ACSM1Q08AH1 577 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 LGALSLQ3ZCW2 172 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF658BQ4V348 819 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 NUDT18Q6ZVK8 323 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 PARS2Q7L3T8 475 aaKnown RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 CXXC5Q7LFL8 322 aaKnown RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF547Q8IVP9 402 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 CCDC116Q8IYX3 515 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 GALNT11Q8NCW6 608 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 OR10H4Q8NGA5 316 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 OR2M2Q96R28 347 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SPRTNQ9H040 489 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 TMEM5Q9Y2B1 443 aa10.34□□□□□ -0.75
CCDC40-203ENST00000374877 EXOGQ9Y2C4 368 aaKnown RBP10.34□□□□□ -0.75
CCDC40-203ENST00000374877 SLC9B1P1A6NJY1 282 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 FZD7O75084 574 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 GAAP10253 952 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 NPR2P20594 1047 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TBXA2RP21731 343 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 DRD5P21918 477 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 KELP23276 732 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 RFX3P48380 749 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 METAP1P53582 386 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 RGS8P57771 180 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-203ENST00000374877 RPS7P62081 194 aaKnown RBP10.33□□□□□ -0.76
CCDC40-203ENST00000374877 RPL6Q02878 288 aaKnown RBP10.33□□□□□ -0.76
CCDC40-203ENST00000374877 FZD5Q13467 585 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 PYHIN1Q6K0P9 492 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 SIAH3Q8IW03 269 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TMEM99Q8N816 258 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 BMPERQ8N8U9 685 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 221.6 ms