RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 MAP6Q96JE9 813 aa15.77■□□□□ 0.12
PHF1-202ENST00000374516 HYLS1Q96M11 299 aa15.77■□□□□ 0.12
PHF1-202ENST00000374516 YIPF4Q9BSR8 244 aa15.77■□□□□ 0.12
PHF1-202ENST00000374516 ZCCHC3Q9NUD5 404 aaKnown RBP15.77■□□□□ 0.12
PHF1-202ENST00000374516 A4GNTQ9UNA3 340 aa15.77■□□□□ 0.12
PHF1-202ENST00000374516 TRDV1A0A1B0GX56 115 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 INMT-MINDY4F8WBC2 141 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 ZNF888P0CJ79 500 aaPredicted RBP15.77■□□□□ 0.11
PHF1-202ENST00000374516 THEGLP0DJG4 465 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 OR12D1P0DN82 309 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 ACP2P11117 423 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 RIN1Q13671 783 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 MRM1Q6IN84 353 aaKnown RBP15.77■□□□□ 0.11
PHF1-202ENST00000374516 ZFP41Q8N8Y5 198 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 XAGE5Q8WWM1 108 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 ARHGAP9Q9BRR9 750 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 TRPC4Q9UBN4 977 aa15.77■□□□□ 0.11
PHF1-202ENST00000374516 A0A1W2PRQ8 180 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 SGK494L7N484 410 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 SHOXO15266 292 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 SRFP11831 508 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 PVRP15151 417 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 INPP1P49441 399 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 RAB25P57735 213 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 STXBP1P61764 594 aaKnown RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 LSM11P83369 360 aaKnown RBP eCLIP15.76■□□□□ 0.117e-8■■□□□ 12.3
PHF1-202ENST00000374516 EIF2B5Q13144 721 aaKnown RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 SMAD4Q13485 552 aaKnown RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 GAS6Q14393 721 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 KIR2DS3Q14952 304 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 SLC37A3Q8NCC5 494 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 ZCCHC10Q8TBK6 192 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 AKAP1Q92667 903 aaKnown RBP eCLIP15.76■□□□□ 0.11
PHF1-202ENST00000374516 GPA33Q99795 319 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 UBE2ZQ9H832 354 aaPredicted RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 B3GNT2Q9NY97 397 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 ACTR10Q9NZ32 417 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 CPNE7Q9UBL6 633 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 TDRD6O60522 2096 aaKnown RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 MEN1O00255 615 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 NCR1O76036 304 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 POU3F3P20264 500 aaPredicted RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 NTSP30990 170 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 AVPR1BP47901 424 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 AP2S1P53680 142 aaPredicted RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 CTBP2P56545 445 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 RPS15AP62244 130 aaKnown RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 SYPL1Q16563 259 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 TRILQ7L0X0 811 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 TAF8Q7Z7C8 310 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 HMGN2P46Q86SG4 172 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 ASPGQ86U10 573 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 SUN3Q8TAQ9 357 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 GPBAR1Q8TDU6 330 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 SLC9A6Q92581 669 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 COQ7Q99807 217 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 OR51I1Q9H343 314 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 LMAN1LQ9HAT1 526 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 WSB2Q9NYS7 404 aaPredicted RBP15.76■□□□□ 0.11
PHF1-202ENST00000374516 SEC14L3Q9UDX4 400 aa15.76■□□□□ 0.11
PHF1-202ENST00000374516 LOC105369274A0A096LPK9 316 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 PRAMEF27A3QJZ7 478 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 P2RX6O15547 441 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 PRODHO43272 600 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 DNAJB6O75190 326 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 LIMS3P0CW19 117 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 LIMS4P0CW20 117 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 SMSP52788 366 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 TDGQ13569 410 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 FZD2Q14332 565 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 DEFB134Q4QY38 66 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 FCRL6Q6DN72 434 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 TMEM107Q6UX40 140 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 OR4N4Q8N0Y3 316 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 SHISA5Q8N114 240 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 SPERTQ8NA61 448 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 SRFBP1Q8NEF9 429 aaKnown RBP15.75■□□□□ 0.11
PHF1-202ENST00000374516 OR4K5Q8NGD3 323 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 ZNF764Q96H86 408 aaPredicted RBP15.75■□□□□ 0.11
PHF1-202ENST00000374516 OR2A5Q96R48 311 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 DCLRE1CQ96SD1 692 aaKnown RBP15.75■□□□□ 0.11
PHF1-202ENST00000374516 ZNF607Q96SK3 696 aa15.75■□□□□ 0.11
PHF1-202ENST00000374516 GAS2L1Q99501 681 aaPredicted RBP15.75■□□□□ 0.11
PHF1-202ENST00000374516 SPTY2D1-AS1A0A0U1RR47 76 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 IRGMA1A4Y4 181 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 SLC28A2O43868 658 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 CD79BP40259 229 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 MTNR1AP48039 350 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 LSSP48449 732 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 AGFG1P52594 562 aaKnown RBP15.74■□□□□ 0.11
PHF1-202ENST00000374516 MLC1Q15049 377 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 NDUFA9Q16795 377 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 SLC48A1Q6P1K1 146 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 FIGLAQ6QHK4 219 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 C9orf62Q8N4C0 152 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 ZNF485Q8NCK3 441 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 SLC37A2Q8TED4 501 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 DNAJA4Q8WW22 397 aaPredicted RBP15.74■□□□□ 0.11
PHF1-202ENST00000374516 CREB3L1Q96BA8 519 aa15.74■□□□□ 0.11
PHF1-202ENST00000374516 WACQ9BTA9 647 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms