RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SLC34A3Q8N130 599 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 SETD6Q8TBK2 473 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 ZCCHC10Q8TBK6 192 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 LIPHQ8WWY8 451 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 PHYHIPQ92561 330 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 FGF11Q92914 225 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 AHCYL2Q96HN2 611 aaKnown RBP8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 VSTM2LQ96N03 204 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF582Q96NG8 517 aaPredicted RBP8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 ZNF426Q9BUY5 554 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 KCNN2Q9H2S1 579 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 LIN28AQ9H9Z2 209 aaKnown RBP8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 ADAP2Q9NPF8 381 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 EQTNQ9NQ60 294 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 EVA1BQ9NVM1 165 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 FAIMQ9NVQ4 179 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 ASB6Q9NWX5 421 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 KLHL21Q9UJP4 597 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 SERTAD3Q9UJW9 196 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 POLHQ9Y253 713 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 LSM2Q9Y333 95 aaKnown RBP8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC6A5Q9Y345 797 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 CAB39Q9Y376 341 aaPredicted RBP8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 SNX11Q9Y5W9 270 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 CHD7Q9P2D1 2997 aa8.09□□□□□ -1.11
SNRNP40-202ENST00000373720 IQCMA0A1B0GVH7 501 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 A0A1W2PQD3 144 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC35F4A4IF30 521 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 METTL15A6NJ78 407 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC9B1P1A6NJY1 282 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF670-ZNF695F2Z2N8 137 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 IMPA2O14732 288 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC30A4O14863 429 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SCAMP1O15126 338 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SULT1C4O75897 302 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 CBX7O95931 251 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 AVPP01185 164 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 IGHA1P01876 353 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 LCKP06239 509 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 HBQ1P09105 142 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 ANKRD34CP0C6C1 535 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 UBL4AP11441 157 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 PEPDP12955 493 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 S1PR1P21453 382 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC6A6P31641 620 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 GABRA5P31644 462 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 GABRA3P34903 492 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 RORAP35398 523 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 HOXD12P35452 270 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 CXCL12P48061 93 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 GABRA4P48169 554 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF136P52737 540 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 CDH11P55287 796 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 PRPS1P60891 318 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 FOXK2Q01167 660 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 RPL6Q02878 288 aaKnown RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 HSF2Q03933 536 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 DUSP2Q05923 314 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 LGALS3BPQ08380 585 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF155Q12901 538 aaPredicted RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 FZD5Q13467 585 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 AQP6Q13520 282 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 IL10RAQ13651 578 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 FGFBP1Q14512 234 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 OR1Q1Q15612 314 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 GPR68Q15743 365 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC35D3Q5M8T2 416 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 MRPL2Q5T653 305 aaKnown RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 AADACL4Q5VUY2 407 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 LAIR1Q6GTX8 287 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 FAM180BQ6P0A1 224 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 ARHGAP11AQ6P4F7 1023 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 CD200R1LQ6Q8B3 271 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SMARCD3Q6STE5 483 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 METAP1DQ6UB28 335 aaPredicted RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 PAMR1Q6UXH9 720 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 LINC00114Q6XXX2 140 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 TRIM73Q86UV7 250 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 RBM45Q8IUH3 476 aaKnown RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 MISPQ8IVT2 679 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 FAM20CQ8IXL6 584 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 GPR135Q8IZ08 494 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 KLHL36Q8N4N3 616 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 OR4C6Q8NH72 309 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 OR14A16Q8NHC5 309 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 C1orf216Q8TAB5 229 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 LMX1AQ8TE12 382 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 ACOT12Q8WYK0 555 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 UFD1Q92890 307 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 DAZLQ92904 295 aaKnown RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 UCN3Q969E3 161 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 UBE2FQ969M7 185 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 KIAA1143Q96AT1 154 aaPredicted RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC6A18Q96N87 628 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 WDFY2Q96P53 400 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 MNTQ99583 582 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 MACROD1Q9BQ69 325 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 YIPF4Q9BSR8 244 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 MROQ9BYG7 248 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 ALOXE3Q9BYJ1 711 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms